Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19f10
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21324-7|AAA62566.1| 265|Caenorhabditis elegans Hypothetical pr... 138 4e-33
U23514-6|AAC46544.2| 816|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical... 29 2.1
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 29 2.1
AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical ... 29 3.6
Z49068-1|CAA88854.2| 499|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z68342-9|CAD91630.2| 626|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U21324-7|AAA62566.1| 265|Caenorhabditis elegans Hypothetical
protein C35D10.10 protein.
Length = 265
Score = 138 bits (333), Expect = 4e-33
Identities = 69/172 (40%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Frame = +3
Query: 120 DFRQLLKPYYWVNILLSLSYVLCKRTSIICNYVFP---ESDCELDSRETEILFFLIIVIM 290
+ R+ L +++ N LL+L++ + + TS+ C+YVF CE+DSRE EIL FL+I++
Sbjct: 8 EVRRALTAFHFFNTLLALAFPVIRSTSL-CDYVFAVEGNEQCEIDSREREILMFLLIILA 66
Query: 291 LRTRKAGSVTMVNYLSSSFVYTKIANLILWFYADIRYGLPYXXXXXXXXXXXPEPTYTGP 470
+ RKA ++Y+++ F+++KIA + L+ ADI G+ Y PEP Y GP
Sbjct: 67 WKGRKA--TNWMHYVNNIFLFSKIAGMFLFIRADILPGIIYILACLIVTVLFPEPVYNGP 124
Query: 471 EHVTYFRGPESLEDELKRNKHATWVVCLYAAWHPACVNFAPVFAELSSSYSL 626
E VTYF+G E L +EL RN++ WV+ + W P C + +PVFAELS ++L
Sbjct: 125 EQVTYFQG-EQLFEELTRNRNTIWVIQFFTTWSPECRHTSPVFAELSQKFTL 175
>U23514-6|AAC46544.2| 816|Caenorhabditis elegans Hypothetical
protein F48E8.4 protein.
Length = 816
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +3
Query: 60 KNLFFCIGT*INPATMSFNSDFRQLLKPYYWVNILLSLSYVLCKRTSIICNYVFPESDCE 239
KNL F + ++F+QLL P Y LLS+ + C+R + +V P S+
Sbjct: 551 KNLKFTVSVSAQRDLYEIEAEFQQLLTPIY---KLLSIQWFQCRRPNYF--HVHPPSEEH 605
Query: 240 LDSRET 257
L+ +T
Sbjct: 606 LEPSDT 611
>AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical
protein Y47H9C.5b protein.
Length = 318
Score = 29.5 bits (63), Expect = 2.1
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 540 WVVCLYAAWHPACVNFAPVFAELS 611
W+V +A W C+ FAP++ +++
Sbjct: 220 WIVDFFAPWCGHCIQFAPIYDQIA 243
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 495 PESLED-ELKRNKHATWVVCLYAAWHPACVNFAP 593
PE E+ + R TW+V +A W C AP
Sbjct: 86 PEQFEELVMNRKDEETWLVDFFAPWCGPCQQLAP 119
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 29.5 bits (63), Expect = 2.1
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 540 WVVCLYAAWHPACVNFAPVFAELS 611
W+V +A W C+ FAP++ +++
Sbjct: 690 WIVDFFAPWCGHCIQFAPIYDQIA 713
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 495 PESLED-ELKRNKHATWVVCLYAAWHPACVNFAP 593
PE E+ + R TW+V +A W C AP
Sbjct: 556 PEQFEELVMNRKDEETWLVDFFAPWCGPCQQLAP 589
>AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical
protein Y73B6BL.12 protein.
Length = 228
Score = 28.7 bits (61), Expect = 3.6
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 540 WVVCLYAAWHPACVNFAPVFAELS 611
W+V +A W C+ FAP++ ++
Sbjct: 130 WIVDFFAPWCGHCIQFAPIYDRIA 153
>Z49068-1|CAA88854.2| 499|Caenorhabditis elegans Hypothetical
protein K01C8.1 protein.
Length = 499
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 344 RRRQIVHHRDASRFSRPQHYHYN 276
R++ I+HH D S S PQ H++
Sbjct: 6 RKKSIIHHHDHSHESTPQKTHHH 28
>Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical
protein T04A8.2 protein.
Length = 335
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 255 TEILFFLIIVIMLRTRKAGSVTMVN--YLSSSFVYTKIANLILWFYADI 395
T ++F+ ++++ R R + Y+S SF+ + + FY+DI
Sbjct: 218 TSVIFYTLVMLPKRLRNVERTLSLGTAYISMSFIILVVFQFLFAFYSDI 266
>Z68342-9|CAD91630.2| 626|Caenorhabditis elegans Hypothetical
protein F38E11.12 protein.
Length = 626
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 108 SFNSDFRQLLKPYYWV--NILLSLSYVLCKRTSIICNYVFP-ESDCELDSRETEIL 266
SF +D QLL+P+Y+ ++++ + I+C + D E+D E EIL
Sbjct: 437 SFLNDISQLLEPHYFCPGDVVIEKGQLCSSMFIIVCGQMVEITEDNEIDHFEGEIL 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,812,270
Number of Sequences: 27780
Number of extensions: 315097
Number of successful extensions: 820
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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