Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19f08
(657 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U36268-1|AAC50684.2| 949|Homo sapiens beta-prime-adaptin protein. 31 4.8
L13939-1|AAC98702.1| 949|Homo sapiens beta-prime-adaptin protein. 31 4.8
CT841508-1|CAJ86438.1| 939|Homo sapiens AP1B1 protein. 31 4.8
BC046242-1|AAH46242.1| 919|Homo sapiens AP1B1 protein protein. 31 4.8
BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining re... 30 6.3
AF498094-1|AAM44808.1| 592|Homo sapiens amphiphysin I variant C... 30 6.3
AB022441-1|BAA37149.1| 501|Homo sapiens Sox30 protein typeII pr... 30 6.3
AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein. 30 6.3
AY309008-1|AAQ77392.1| 410|Homo sapiens mu opioid receptor spli... 30 8.3
>U36268-1|AAC50684.2| 949|Homo sapiens beta-prime-adaptin protein.
Length = 949
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 126 PPRHLSLSKPLNHQRSQHAFDP-NNETKEINNNVSETRFSTFKPQHRINTRDRQNNNNQI 302
P + + +S PL+ S +P NN + NN+ FST P H + D + +
Sbjct: 787 PNQTVEISLPLSTVGSVMKMEPLNNLQVAVKNNIDVFYFSTLYPLHILFVEDGKMDRQMF 846
Query: 303 SKTNHDVEYSKDPKF 347
T D+ + +F
Sbjct: 847 LATWKDIPNENEAQF 861
>L13939-1|AAC98702.1| 949|Homo sapiens beta-prime-adaptin protein.
Length = 949
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 126 PPRHLSLSKPLNHQRSQHAFDP-NNETKEINNNVSETRFSTFKPQHRINTRDRQNNNNQI 302
P + + +S PL+ S +P NN + NN+ FST P H + D + +
Sbjct: 787 PNQTVEISLPLSTVGSVMKMEPLNNLQVAVKNNIDVFYFSTLYPLHILFVEDGKMDRQMF 846
Query: 303 SKTNHDVEYSKDPKF 347
T D+ + +F
Sbjct: 847 LATWKDIPNENEAQF 861
>CT841508-1|CAJ86438.1| 939|Homo sapiens AP1B1 protein.
Length = 939
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 126 PPRHLSLSKPLNHQRSQHAFDP-NNETKEINNNVSETRFSTFKPQHRINTRDRQNNNNQI 302
P + + +S PL+ S +P NN + NN+ FST P H + D + +
Sbjct: 780 PNQTVEISLPLSTVGSVMKMEPLNNLQVAVKNNIDVFYFSTLYPLHILFVEDGKMDRQMF 839
Query: 303 SKTNHDVEYSKDPKF 347
T D+ + +F
Sbjct: 840 LATWKDIPNENEAQF 854
>BC046242-1|AAH46242.1| 919|Homo sapiens AP1B1 protein protein.
Length = 919
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 126 PPRHLSLSKPLNHQRSQHAFDP-NNETKEINNNVSETRFSTFKPQHRINTRDRQNNNNQI 302
P + + +S PL+ S +P NN + NN+ FST P H + D + +
Sbjct: 760 PNQTVEISLPLSTVGSVMKMEPLNNLQVAVKNNIDVFYFSTLYPLHILFVEDGKMDRQMF 819
Query: 303 SKTNHDVEYSKDPKF 347
T D+ + +F
Sbjct: 820 LATWKDIPNENEAQF 834
>BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining
region Y)-box 30 protein.
Length = 753
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 549 KEEFFDELEKAERKHDKVMNAEDCQPRPGKVK 644
K+ ++DE +K + KH + QPRPGK K
Sbjct: 383 KKPYYDEAQKIKEKHREEFPGWVYQPRPGKRK 414
>AF498094-1|AAM44808.1| 592|Homo sapiens amphiphysin I variant CT4
protein.
Length = 592
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +1
Query: 229 RRDSARLNHNTESIQGTDRIITIKSAKQITTLNIQRIQSLGSNEGTAVWITSIQTTEQEI 408
RRD + I+G++R +T + + I I S G++ G +W S+ + +
Sbjct: 297 RRDLCSCKAESSLIEGSERTVTENRSHTVNLPRIAEIDSWGTDPG-QIWQPSLDSAMNNL 355
Query: 409 HIIG 420
I G
Sbjct: 356 DITG 359
>AB022441-1|BAA37149.1| 501|Homo sapiens Sox30 protein typeII
protein.
Length = 501
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 549 KEEFFDELEKAERKHDKVMNAEDCQPRPGKVK 644
K+ ++DE +K + KH + QPRPGK K
Sbjct: 383 KKPYYDEAQKIKEKHREEFPGWVYQPRPGKRK 414
>AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein.
Length = 753
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 549 KEEFFDELEKAERKHDKVMNAEDCQPRPGKVK 644
K+ ++DE +K + KH + QPRPGK K
Sbjct: 383 KKPYYDEAQKIKEKHREEFPGWVYQPRPGKRK 414
>AY309008-1|AAQ77392.1| 410|Homo sapiens mu opioid receptor splice
variant hMOR-1B5 protein.
Length = 410
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 261 RINTRDRQNNNNQISKTNHDVEYSKD 338
R NTRD + N + +TNH VE + D
Sbjct: 369 RQNTRDHPSTANTVDRTNHQVELNLD 394
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,015,915
Number of Sequences: 237096
Number of extensions: 1752989
Number of successful extensions: 4976
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4976
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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