Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19f06
         (532 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical pr...    31   0.68 
Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical pr...    31   0.68 
Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical pr...    31   0.68 
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL032646-7|CAA21680.1|  485|Caenorhabditis elegans Hypothetical ...    29   2.7  
AL132860-32|CAO82074.1|  570|Caenorhabditis elegans Hypothetical...    27   6.3  
AL132860-31|CAB60519.2|  457|Caenorhabditis elegans Hypothetical...    27   6.3  

>Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK849.2c protein.
          Length = 390

 Score = 30.7 bits (66), Expect = 0.68
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 77  KSVEKKILAAMNKECKKREKTASNLNESIKAKLKESLTQ 193
           K VE+ ++   + +C+   KTA + ++ IK KL+  LTQ
Sbjct: 100 KEVEQLMIQVHSLQCQLHSKTAPHESDMIKKKLETQLTQ 138


>Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical
           protein ZK849.2b protein.
          Length = 412

 Score = 30.7 bits (66), Expect = 0.68
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 77  KSVEKKILAAMNKECKKREKTASNLNESIKAKLKESLTQ 193
           K VE+ ++   + +C+   KTA + ++ IK KL+  LTQ
Sbjct: 122 KEVEQLMIQVHSLQCQLHSKTAPHESDMIKKKLETQLTQ 160


>Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical
           protein ZK849.2a protein.
          Length = 414

 Score = 30.7 bits (66), Expect = 0.68
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 77  KSVEKKILAAMNKECKKREKTASNLNESIKAKLKESLTQ 193
           K VE+ ++   + +C+   KTA + ++ IK KL+  LTQ
Sbjct: 124 KEVEQLMIQVHSLQCQLHSKTAPHESDMIKKKLETQLTQ 162


>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
           protein T20F7.5 protein.
          Length = 1065

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = +2

Query: 74  MKSVEKKILAAMNKECKKREKTASNLNESIKAKLKES 184
           +K+++KK+L  +NKE KKR K   +  E+ K+ +K S
Sbjct: 840 LKNLKKKLLNKLNKEKKKRSK--KSRFEATKSNIKVS 874


>AL032646-7|CAA21680.1|  485|Caenorhabditis elegans Hypothetical
           protein Y54E2A.8 protein.
          Length = 485

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +1

Query: 223 KSNFKNETE*REEGGILQLQEHVVAKRGVARRRPTEESEQTHEKTCEKCQNQK 381
           K   K E + R   G+LQL+      +   +RR   E E+  E+  EK + +K
Sbjct: 283 KEKLKKELDRRPNDGVLQLETEDFDWKPRRKRRKELEKEREAEEAAEKRKKEK 335


>AL132860-32|CAO82074.1|  570|Caenorhabditis elegans Hypothetical
           protein Y56A3A.7b protein.
          Length = 570

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = +2

Query: 122 KKREKTASNLNESIKAKLKESLTQNTVVTGDTASNQISRTRQSNVKK 262
           +++EK    + E+IK ++++    NT++    AS    R R   ++K
Sbjct: 274 EEKEKRREEIRENIKKEMEKKEQVNTLIREKLASMNARRKRLQEIRK 320


>AL132860-31|CAB60519.2|  457|Caenorhabditis elegans Hypothetical
           protein Y56A3A.7a protein.
          Length = 457

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = +2

Query: 122 KKREKTASNLNESIKAKLKESLTQNTVVTGDTASNQISRTRQSNVKK 262
           +++EK    + E+IK ++++    NT++    AS    R R   ++K
Sbjct: 274 EEKEKRREEIRENIKKEMEKKEQVNTLIREKLASMNARRKRLQEIRK 320


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,032,422
Number of Sequences: 27780
Number of extensions: 175289
Number of successful extensions: 507
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)