Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19f05
(648 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 44 2e-05
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.027
SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr 3||... 33 0.035
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 29 0.58
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 29 0.58
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 29 0.76
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 28 1.0
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 28 1.0
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 28 1.3
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 27 1.8
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 27 2.3
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 27 3.1
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 27 3.1
SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 27 3.1
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 27 3.1
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 27 3.1
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 27 3.1
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 27 3.1
SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyc... 26 4.1
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 26 4.1
SPAC17H9.05 |ebp2||rRNA processing protein Ebp2|Schizosaccharomy... 26 5.4
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 26 5.4
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.4
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 25 7.1
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 25 7.1
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 25 7.1
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 25 7.1
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 25 7.1
SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr... 25 9.4
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 25 9.4
SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation fac... 25 9.4
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 25 9.4
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 9.4
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 44.0 bits (99), Expect = 2e-05
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 133 DDALKWDVDMEIQLFYAMANH-KPVGINKHFQMACIWEKLSNSVTKE-ISTQDIWKHLGS 306
D +W V E L A+ +PVGI K+F M I ++ + + I QD+W LG+
Sbjct: 28 DSVTEWSVLEETLLLKAICRGLRPVGIEKNFYMIGILREIRDGCKRSTIKAQDVWNKLGT 87
Query: 307 LYDFTMLDEAE 339
LY+ +E E
Sbjct: 88 LYNLKEFEELE 98
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 33.5 bits (73), Expect = 0.027
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 415 SKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKESGSS 594
S LVS T +PS S+ S+S ++S + S + S S +++T +S
Sbjct: 124 SSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTSHRTTS 183
Query: 595 HAST 606
H S+
Sbjct: 184 HKSS 187
>SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 465
Score = 33.1 bits (72), Expect = 0.035
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -2
Query: 248 NFSHIQAIWKCLFIPTGLWLAIA*NNCISISTSHFKASSCF-VSGSSSLETIFN*LIWL 75
NF I I+ LFIP +L + + IS + F +CF + GSSS+ ++ L+WL
Sbjct: 27 NFESILEIFSVLFIP---FLCNSGKKFLQISNASFFLPACFYLLGSSSIIQLYEPLLWL 82
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 29.1 bits (62), Expect = 0.58
Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Frame = +1
Query: 325 LDEAEPIPFPNHEITFCLPENEFGALMKQ-KSKEVLVSEETEDKDGRSPSPKSTPRSNSK 501
L A PIP ++ + A K SK + S S SP++TP ++
Sbjct: 214 LSTASPIPVRTSSVSSTYLTQDREASSKNCLSKALAFSSIEPPASSASTSPRNTPTPSNN 273
Query: 502 GTASKDNMSKGTRKDSISALATKTR---KESGSSHASTDTPS 618
GT+ N++ +S + T S S S TPS
Sbjct: 274 GTSINANVTSSLTSNSTGKTSKTTDLLIAASKKSLPSNSTPS 315
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 29.1 bits (62), Expect = 0.58
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +1
Query: 457 GRSPSPKSTPRSNSKGTASKDN 522
G S SPKSTP SNS G A N
Sbjct: 300 GASVSPKSTPGSNSTGAAVDTN 321
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 28.7 bits (61), Expect = 0.76
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 409 QKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISA 558
+ + V+ ++ D+ PK TP SNS + + +N S K+ S+
Sbjct: 211 ESAAAVIKEDKVSDRKKSKKKPKKTPVSNSTASQASENASDKKTKEKKSS 260
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 28.3 bits (60), Expect = 1.0
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +1
Query: 415 SKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKESGSS 594
+K V V++ + D S SPK + S G++ D+MS+ +K S ++ +G
Sbjct: 20 NKRVKVAKLPKKVD--SFSPKKKKNTTSSGSSESDSMSQNDKKKDSSLNESEDEDFAGFG 77
Query: 595 HASTDTPSIKS 627
++++ ++S
Sbjct: 78 ESASENDELES 88
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 28.3 bits (60), Expect = 1.0
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 406 KQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRK--DSISALATKTRK 579
K + K+ +E+E ++ SP +T + +GT K+ K + A K K
Sbjct: 180 KAQVKKKRTKDESEQEEAASPKKNNTKKQKVEGTPVKEKKVAFAEKLEQGPTGPAAKKEK 239
Query: 580 ESGSSHASTDTPSIKSEK 633
+ SS+A + +P ++ K
Sbjct: 240 QQASSNAPS-SPKTRTLK 256
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/89 (21%), Positives = 34/89 (38%)
Frame = +1
Query: 376 LPENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSIS 555
LP N+ + Q ++ V E E + + K S T + KD++
Sbjct: 438 LPTNDHSSTPAQSERDSDVEELREQLENLTALTKKLSERLSSSTFDNSKFIRTEDKDTVR 497
Query: 556 ALATKTRKESGSSHASTDTPSIKSEKEYD 642
+ + ++ S TD P++K K D
Sbjct: 498 SAKLEICEKFFSFADVTDDPTLKDPKHQD 526
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 27.5 bits (58), Expect = 1.8
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = +1
Query: 433 SEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKESGSSHASTDT 612
+E KD RS + STP +N S SKG L T + E+ +S S +
Sbjct: 549 NEHGSPKDIRSAA--STP-ANPVYNRSSSQTSKGYNSSDYDLLRTHSLDENVNSPTSISS 605
Query: 613 PSIKS 627
PS KS
Sbjct: 606 PSSKS 610
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 379 PENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNS 498
PE+ F L ++K+ + +E E + +P STP+S++
Sbjct: 52 PEDPFANLFQKKTDNKISLKELERQKVGTPDSNSTPKSSN 91
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 26.6 bits (56), Expect = 3.1
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +1
Query: 415 SKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSIS---ALATKTRKES 585
S E VSEE D++ PSP +++K ++ KGT+K +++ +L + +K
Sbjct: 225 SSESEVSEEESDQEMSEPSPIEEDYNDTK---ARRITRKGTKKKTVTFDPSLESVPQKRL 281
Query: 586 GSSHASTDTPSIKS 627
+S + P+ K+
Sbjct: 282 NASSNVSSNPAKKT 295
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 26.6 bits (56), Expect = 3.1
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = -2
Query: 404 IKAPNSFSGKQNVIS*LGNGIGSASS-NIVKSY----KLPKCFHI-SWVDISLVTEFDNF 243
I PN F G ++ S N +GS+SS N+V ++ K+P + D+ ++ DN
Sbjct: 374 ISIPNPFQGVESANSDAANNLGSSSSLNLVDTFLTGEKIPLWPLLQKGRDVDVIVAVDNG 433
Query: 242 SHIQAIW 222
+ +W
Sbjct: 434 DDSEWLW 440
>SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 523 MSKGTRKDSISALATKTRKESGSSHASTD 609
MSK +S+ T+KES +SH+ TD
Sbjct: 418 MSKNLSMRFVSSFEASTKKESINSHSETD 446
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 349 FPNHEITFCLPENEFGALMKQKSKEVLVSEE 441
F NHE F L + G L K+ +K SEE
Sbjct: 273 FSNHETKFVLVDTSTGELKKEPTKLERASEE 303
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 3.1
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +1
Query: 409 QKSKEVLVSEETEDKDGRSPSPKSTPRSNSK-----GTASKDNMSKGTRKDSIS 555
Q +E L EE E++D +P P T + NS+ G ASK S+ T D S
Sbjct: 76 QVDEEELEEEEEEEEDA-TPEPVVTSKKNSRSKPKNGGASKRKASRRTVVDEDS 128
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 478 STPRSNSKGTASKDNMSKGTRKDSISALATKT--RKESGSSHASTDT 612
S+ ++S ++SK + S +R S S+ ++++ SGSSH T T
Sbjct: 520 SSVHTSSATSSSKSSSSSSSRSGSSSSSSSRSGSTSSSGSSHTITST 566
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 250 SNSVTKEISTQDIWKHLGSLYDFTMLDEAEP 342
SN V+K ++ +DI+ G YDF +P
Sbjct: 857 SNKVSKRLAAEDIYSANGGDYDFIFAASNDP 887
>SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 618
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 97 MVSSEEEPETKQDDAL-KWDVDMEIQLFYAMANHKPVGINK 216
M + + E K++DAL K DV+ E+ Y+MA+ + K
Sbjct: 567 MEDEQNQLEFKRNDALTKKDVEKEVHDSYSMADESQYNLEK 607
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +1
Query: 421 EVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKESGSSH 597
E V + + K SP+P++TP+ +K + S R++ S+ K +K + H
Sbjct: 44 EDFVKQIEKQKLTGSPNPQATPKQENKSNFFSEKQS--VRENGNSSAGEKKQKWTSEQH 100
>SPAC17H9.05 |ebp2||rRNA processing protein Ebp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 333
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/59 (22%), Positives = 23/59 (38%)
Frame = +1
Query: 382 ENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISA 558
E++F + S + K P+PK ++ G + SK DS++A
Sbjct: 248 EDDFDIALSSASADTFKKGSRSTKSRPQPNPKRQKKNEKYGFGGPKHRSKSNDLDSLAA 306
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +1
Query: 109 EEEPETKQDDALKWDVDMEIQLFYAMANHKPVGINKHFQMACIWEKLSNSVTKEISTQDI 288
E E K++ + VD+ +QL + +H P+ + ++ + + + V E D+
Sbjct: 323 ELESNVKEEGTM---VDVWMQLCTYIDSHNPIQFHLPHSISSFFRGVGSGVMGEYIETDV 379
Query: 289 WKHLGS 306
KHL S
Sbjct: 380 LKHLKS 385
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 5.4
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 478 STPRSNSKGTASKDNMSK---GTRKDSISALATKTRKESGSSHASTDTPSIKSEK 633
ST + GT S +++ GTR S + + + S SS +S+ +PS S K
Sbjct: 117 STSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSK 171
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 442 TEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKESGSSHASTDTPSI 621
T + P+ S P SK T++ + +KG S A+ T+K SS + S
Sbjct: 82 TRTRSQYKPNSTSNP---SKHTSAYASYNKGKNSKWSSPFASTTKKPQESSEKYSKKSST 138
Query: 622 KSEKEYDRR 648
+ ++ ++++
Sbjct: 139 RKKEHFNKK 147
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 25.4 bits (53), Expect = 7.1
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +1
Query: 382 ENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDN----MSKGTRKDS 549
E E LM+++ + + ++ +S + + + A K + + K ++ S
Sbjct: 105 EEEISKLMERRELAIRLHQQNAQYMAQSTRRSTRDKPLTSAAAGKRDKLTELKKRRQERS 164
Query: 550 ISALATKTRKESGSSHASTDTPSIKSEKE 636
+++ +TRK S S S KSE+E
Sbjct: 165 ARSVSERTRKRSPVSDYEEQNESEKSEEE 193
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 439 ETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRK 579
++ED++ +PS + T + + +K KG +KD L K RK
Sbjct: 388 DSEDEEYNNPSTQKTEKVSQSKKGAKVKEEKGLKKD--RKLPKKMRK 432
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 382 ENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSK 501
ENEF A S L ++ T + + SP+P STP+ SK
Sbjct: 240 ENEFLASPMDPSLSKLFTKTT-NTEKISPTPFSTPKRKSK 278
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 25.4 bits (53), Expect = 7.1
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +1
Query: 382 ENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDS 549
ENE +K + KE + ++ S+ +KG+ SKD S+ K S
Sbjct: 208 ENETKDEIKSEKKEPEIKKQEGGSSTEKVGQPSSSDDKAKGSTSKDQPSEEEEKTS 263
>SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 553
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 523 MSKGTRKDSISALATKTRKESGSSHASTDT 612
+ KGT++ S+ +L T KES + S D+
Sbjct: 247 IKKGTKEYSLKSLEMTTTKESNETLCSNDS 276
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 25.0 bits (52), Expect = 9.4
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 436 EETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKESGSSH-ASTDT 612
E ++ +S SP + + S+ + S R + A K RK+SGSS +T
Sbjct: 187 ESVSERLSKSGSPSVGAQHDLDEVISEKDTSLSRRSSRGRSSAPKRRKDSGSSKTTATYI 246
Query: 613 PSIKSEK 633
P S+K
Sbjct: 247 PHNPSKK 253
>SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation factor
complex subunit Spp27|Schizosaccharomyces pombe|chr
3|||Manual
Length = 233
Score = 25.0 bits (52), Expect = 9.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +1
Query: 436 EETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKESG 588
+ET + K P +KG + +N GT + A T+ RKE G
Sbjct: 53 DETAAPSEKESLEKQAPARKTKGKRATEN---GTEEGKKPAKRTRKRKEDG 100
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 25.0 bits (52), Expect = 9.4
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 5/164 (3%)
Frame = +1
Query: 163 EIQLFYAMANHKPVGINKHFQMACIWEKLSNSVTKEISTQDIWKHLGSLYDFTMLDEAEP 342
+I+LF A KP K + LS+S ++E + I K + D +
Sbjct: 408 DIELFRAPTIQKPA--EKDAKAERKKSGLSSSTSEESLNRHISKRSSNSNDTA--PSSHI 463
Query: 343 IPFPNHEIT--FCLPENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNS---KGT 507
I N E T L +N G L++ + E+ S+E +S + N+ K T
Sbjct: 464 IADKNLEPTSNIQLKKNPDGNLVE--TSELSDSDENSVLSNKSSTLSKKVVENTSPLKYT 521
Query: 508 ASKDNMSKGTRKDSISALATKTRKESGSSHASTDTPSIKSEKEY 639
S G +DS+ AL TK K S+ T ++ K+Y
Sbjct: 522 HSASKSFIGEVQDSLQALKTKAHKPRSIGGDSSQTTLSETTKKY 565
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 241 EKLSNSVTKEISTQDIWKHLGSLYDFTMLDEAEPIPFPNH 360
E L++S K ST+ +W + +++ T E P NH
Sbjct: 3943 ESLADSYLKLASTEPLWLFINNIHLSTPWAEKLPSKMSNH 3982
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.126 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,496,564
Number of Sequences: 5004
Number of extensions: 51477
Number of successful extensions: 154
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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