Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19f03
(688 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 330 5e-91
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 327 4e-90
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 315 2e-86
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 212 3e-55
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 161 6e-40
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 159 2e-39
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 157 1e-38
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 155 3e-38
03_01_0034 + 318432-318825,318902-319851 155 3e-38
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 154 7e-38
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 138 5e-33
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 136 2e-32
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 111 5e-25
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.86
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 31 1.1
09_02_0196 - 5678744-5679222,5679304-5679937 29 3.5
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 3.5
06_02_0151 - 12299935-12300189,12300713-12300986,12301072-123013... 29 4.6
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 28 6.0
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 6.0
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 28 8.0
07_01_0284 - 2082249-2082256,2082496-2083009 28 8.0
05_03_0130 - 8770354-8770678,8770799-8770992,8771091-8771203,877... 28 8.0
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 330 bits (812), Expect = 5e-91
Identities = 148/183 (80%), Positives = 162/183 (88%)
Frame = +1
Query: 139 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 318
MRECISIH GQAG+Q+GNACWELYCLEHGIQPDGQMP DKTVGGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 319 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 498
HVPRAVF+DLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 499 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 678
R+RKLAD CTGLQGFL+ LL+ERLSVDYGKKSKL F +YP+PQ+ST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 679 VVE 687
VVE
Sbjct: 181 VVE 183
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 327 bits (804), Expect = 4e-90
Identities = 147/183 (80%), Positives = 161/183 (87%)
Frame = +1
Query: 139 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 318
MRECISIH GQAG+Q+GNACWELYCLEHGIQ DGQMPSD+TVGGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 319 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 498
HVPRAVF+DLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 499 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 678
R+RKLAD CTGLQGFL+ LL+ERLSVDYGKKSKL F +YP+PQ+ST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 679 VVE 687
VVE
Sbjct: 181 VVE 183
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 315 bits (774), Expect = 2e-86
Identities = 143/183 (78%), Positives = 158/183 (86%)
Frame = +1
Query: 139 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 318
MRE ISIH GQAG+Q+GNACWELYCLEHGI+PDG MPSD TVG D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 319 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 498
HVPRA+F+DLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 499 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 678
RVRKLAD CTGLQGFL+ LL+ERLSVDYGKKSKL F IYP+PQ+STA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 679 VVE 687
VVE
Sbjct: 181 VVE 183
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 212 bits (517), Expect = 3e-55
Identities = 97/139 (69%), Positives = 113/139 (81%)
Frame = +1
Query: 250 SDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKE 429
SD T G D+FNTFFSET +GKHVPRA+F+DLEPTV+DEV+TG YRQLFHPEQLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 430 DAANNYARGHYTIGKEIVDLVLDRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 609
DAANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQGFL+ LL+ERL
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 217
Query: 610 SVDYGKKSKLEFAIYPAPQ 666
SVDYG+KSKL F IYP+PQ
Sbjct: 218 SVDYGRKSKLGFTIYPSPQ 236
Score = 80.2 bits (189), Expect = 1e-15
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +1
Query: 139 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSD 255
MRE ISIH GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 161 bits (390), Expect = 6e-40
Identities = 76/184 (41%), Positives = 109/184 (59%)
Frame = +1
Query: 136 KMRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAG 315
KMRE + I GQ G QIG+ WE+ C EHGI P G+ + + N +++E G
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYNEASCG 237
Query: 316 KHVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 495
+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 238 RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 297
Query: 496 DRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQIST 675
D VRK A+ C LQGF + LL+ ++ +Y + L F+++P+P++S
Sbjct: 298 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 357
Query: 676 AVVE 687
VVE
Sbjct: 358 TVVE 361
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 159 bits (386), Expect = 2e-39
Identities = 78/186 (41%), Positives = 110/186 (59%), Gaps = 3/186 (1%)
Frame = +1
Query: 139 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGD---DSFNTFFSETG 309
MRE + I GQ G QIG+ WE+ C EHGI P G+ VG D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 310 AGKHVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 489
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 490 VLDRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQI 669
VLD VRK A+ C LQGF + LL+ ++ +Y + L F+++P+P++
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
Query: 670 STAVVE 687
S VVE
Sbjct: 176 SDTVVE 181
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 157 bits (380), Expect = 1e-38
Identities = 74/183 (40%), Positives = 108/183 (59%)
Frame = +1
Query: 139 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 318
MRE + I GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 319 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 498
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 499 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 678
VRK A+ C LQGF + LL+ ++ +Y + L F+++P+P++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 679 VVE 687
VVE
Sbjct: 179 VVE 181
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 155 bits (376), Expect = 3e-38
Identities = 72/183 (39%), Positives = 108/183 (59%)
Frame = +1
Query: 139 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 318
MRE + I GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 319 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 498
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 499 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 678
VRK A+ C LQGF + LL+ ++ +Y + L F+++P+P++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 679 VVE 687
VVE
Sbjct: 179 VVE 181
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 155 bits (376), Expect = 3e-38
Identities = 73/183 (39%), Positives = 106/183 (57%)
Frame = +1
Query: 139 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 318
MRE + I GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 319 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 498
VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 499 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 678
VRK A+ C LQGF + LL+ ++ +Y + L F+++P+P++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 679 VVE 687
VVE
Sbjct: 179 VVE 181
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 154 bits (373), Expect = 7e-38
Identities = 73/183 (39%), Positives = 107/183 (58%)
Frame = +1
Query: 139 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 318
MRE + I GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 319 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 498
VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 499 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 678
VRK A+ C LQGF + LL+ ++ +Y + L F+++P+P++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 679 VVE 687
VVE
Sbjct: 179 VVE 181
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 138 bits (333), Expect = 5e-33
Identities = 75/204 (36%), Positives = 108/204 (52%), Gaps = 21/204 (10%)
Frame = +1
Query: 139 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 318
MRE + I GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 319 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 498
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 499 RVRKLADQCTGLQ---------------------GFLIXXXXXXXXXXXXXXLLMERLSV 615
VRK A+ C LQ GF + LL+ ++
Sbjct: 119 VVRKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGMGTLLISKIRE 178
Query: 616 DYGKKSKLEFAIYPAPQISTAVVE 687
+Y + L F+++P+P++S VVE
Sbjct: 179 EYPDRMMLTFSVFPSPKVSDTVVE 202
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 136 bits (329), Expect = 2e-32
Identities = 73/199 (36%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Frame = +1
Query: 139 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 318
MRE + I GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 319 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 498
HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 499 RVRKLADQCTGLQ----------------GFLIXXXXXXXXXXXXXXLLMERLSVDYGKK 630
VRK A+ C LQ GF + LL+ ++ +Y +
Sbjct: 119 VVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 178
Query: 631 SKLEFAIYPAPQISTAVVE 687
L F+++P+P++S VVE
Sbjct: 179 MMLTFSVFPSPKVSDTVVE 197
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 111 bits (267), Expect = 5e-25
Identities = 60/183 (32%), Positives = 98/183 (53%), Gaps = 2/183 (1%)
Frame = +1
Query: 142 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 321
RE I+I GQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 322 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 495
+PRA+ +DLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
Query: 496 DRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQIST 675
D + + AD L+GF++ L+E L+ Y KK ++++P ++
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 676 AVV 684
VV
Sbjct: 180 DVV 182
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 31.1 bits (67), Expect = 0.86
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 278 SSPPPTVLSEGICPSGWMPCSRQYSSQ 198
S P P LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 245 CPRTKPSAAETIPSTHSSAKQEPVNMFL 328
C TKP A+E S+ S +K++PV +L
Sbjct: 66 CEETKPDASEETSSSESGSKKKPVKRYL 93
>09_02_0196 - 5678744-5679222,5679304-5679937
Length = 370
Score = 29.1 bits (62), Expect = 3.5
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3
Query: 182 CTPAWPAWIDMHSRI 138
C P W AW+++H+R+
Sbjct: 33 CGPVWEAWVEVHTRV 47
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 272 PPPTVLSEGICPSGWMPCSR 213
P P LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>06_02_0151 -
12299935-12300189,12300713-12300986,12301072-12301378,
12301467-12301714,12303181-12303480,12303564-12303620,
12304831-12304940,12305053-12305382
Length = 626
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 557 RSVAAPDQVLHHSLWNVSPSIMVRNPNL 640
RS A P +VLH VSPS V NP L
Sbjct: 103 RSDAIPREVLHACYTKVSPSAPVDNPKL 130
>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -3
Query: 221 CSRQYSSQ-HALPICTPAWPAWIDMHSRILFYFNINSSNYTNFYFEKTLLQL 69
C R+ HAL C A W+ MH ++ S + NF+ L +L
Sbjct: 1484 CDREKEDAGHALCCCVHANSLWVSMHKSGSISLDVKSIQFDNFWLFDCLEKL 1535
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 266 PTVLSEGICPSGWMPCSRQYSSQ 198
P LS I SGW+PCSR S+
Sbjct: 184 PVTLSAVIGLSGWLPCSRTLKSK 206
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +2
Query: 50 SNLDDNPVGAAFSQNKSSCNLKN*Y*NKTKCVSAYLSTRARLVCKSATRVGSCIVSNMAS 229
++LD +P G F+ S N+K K C+ Y R+ T G IVS +
Sbjct: 110 ASLDFHPFGEFFASGSSDTNMKIWDMRKKGCIHTYKGHTRRIDVLRFTPDGRWIVSGGSD 169
Query: 230 N 232
N
Sbjct: 170 N 170
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -3
Query: 311 APVSLKNVLKESSPPPTVLSEGICPSGWMPCSRQYSSQHALPI 183
+P+ K E PPP+ + I W P + ++Q +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>05_03_0130 -
8770354-8770678,8770799-8770992,8771091-8771203,
8771320-8771482
Length = 264
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 326 GTCLPAPVSLKNVLKESSPPPTVLSEGICPSGWMP 222
G L AP+S++ SS T+++ + PSGW P
Sbjct: 223 GAALQAPLSIRLT---SSSGKTLVASNVIPSGWKP 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,749,638
Number of Sequences: 37544
Number of extensions: 441914
Number of successful extensions: 1615
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1602
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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