Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19e23
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         29   0.12 
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       24   4.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.9  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 469 PLVSYRSSRTDCRRPHQRRPLREEYHSCR 383
           P    +SS+TD R P Q  P  +++ SCR
Sbjct: 309 PARKRKSSKTDHRHPFQYHPTYDQHKSCR 337


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +1

Query: 142 NGSIAEAV-NLSKQRNTIFVVFIQGDNDLSDEMSSTLNDVVVRSKLSNESN 291
           N S+ +A  ++ +Q   + V  I+ ++   DE  ++L+ VVV  ++  ESN
Sbjct: 58  NNSVLQAYKDVLEQNYAVEVRDIERNDYNFDEPKTSLDPVVVEEEIIEESN 108


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 496  NDHSDAFIKVLDEYSESDNYELVCGDE 576
            + +S A     DEY E D+Y L  G E
Sbjct: 1324 SSNSSANFYSSDEYDEEDDYYLYDGSE 1350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,551
Number of Sequences: 2352
Number of extensions: 12469
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)