Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19e23
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr... 33 0.17
U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical pr... 32 0.29
U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical pr... 32 0.29
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 30 1.6
U40410-4|AAA81393.1| 259|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z49125-7|CAN99660.1| 717|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical p... 28 6.3
AL021488-2|CAA16367.2| 378|Caenorhabditis elegans Hypothetical ... 27 8.3
>L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical
protein ZK353.8 protein.
Length = 469
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +1
Query: 130 MRWYNGSIAEAVNLSKQRNTIFVVFIQGDNDLSDEMSSTLNDVVVRSKLSNESNFLAVNL 309
M+W+ G++A A+ +S++ + +V+I D++ + + L + + L
Sbjct: 1 MQWFGGNVATAIQISRKNKALLIVYITTDSEDGQIFDGFWQHIDSSNLLCA---VVGIKL 57
Query: 310 KSGSTNYTHFAQIYQIVPVPSLFFIGRNGTPLEVV--CAGVDADNLSARIDRILAE 471
K+G T+ FA IY +P+ + I +NG PLEV+ G D A+ D+ A+
Sbjct: 58 KAGETSAQQFADIYPTPILPAAYLIDQNGKPLEVITPLVGKTYDQFRAKFDKATAQ 113
>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
protein M18.5 protein.
Length = 1134
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 211 GDNDLSDEMSSTLNDVVVRSKLSNESNFLAVNLKSGSTNYTHFAQIYQ-IVPVPSLFFIG 387
G+ ++D ++ N VV +S + + + +Y+ + Y I P+ + +
Sbjct: 303 GETSIADSINYIDNGVVFVGSRLGDSQLIRLMTEPNGGSYSVILETYSNIGPIRDMVMVE 362
Query: 388 RNGTPLEVVCAGVDADNLSARIDR 459
+G P V C G D D S R+ R
Sbjct: 363 SDGQPQLVTCTGADKDG-SLRVIR 385
>U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical
protein C35D10.7b protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 391 NGTPLEVVCAGVDADNLSARIDRI---LAEHRQENPKINDHSDAFIKVLDEYSE 543
+G L++ A V A NL ++ + L +H+ +ND + FIK L+E+++
Sbjct: 82 HGDHLQMQVASVIASNLGPMVEIVEKKLLQHKNAEKLLNDGREVFIKTLEEHNQ 135
>U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical
protein C35D10.7a protein.
Length = 537
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 391 NGTPLEVVCAGVDADNLSARIDRI---LAEHRQENPKINDHSDAFIKVLDEYSE 543
+G L++ A V A NL ++ + L +H+ +ND + FIK L+E+++
Sbjct: 133 HGDHLQMQVASVIASNLGPMVEIVEKKLLQHKNAEKLLNDGREVFIKTLEEHNQ 186
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 448 RIDRILAEHRQENPKINDHSDAFIKVLDEYSE-SDNYELVCGDE 576
RIDR+ + Q N +ND F+ LD + E D L C E
Sbjct: 626 RIDRVQQQQTQPNSSVNDVERDFVHTLDVFPECCDAVSLNCFQE 669
>U40410-4|AAA81393.1| 259|Caenorhabditis elegans Hypothetical
protein C54G7.1 protein.
Length = 259
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 403 EEYHSCR*RIMTAPARFDIFVRNVYSWLIHSSD*RPESLIHLRVSI*P 260
+EYHSC R PA+ +I ++ W+I D R ++ RV+I P
Sbjct: 75 DEYHSCLQRCPNVPAK-EILIKGQNVWMILCHDFRNDT--DFRVNIVP 119
>Z49125-7|CAN99660.1| 717|Caenorhabditis elegans Hypothetical
protein C47G2.5b protein.
Length = 717
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 183 PLFR*IHGLRDATVVPTHGKLSISQNSVKFFNLINVLK 70
PL R I L + + TH K++++ S+ F NLI K
Sbjct: 362 PLLRLIIELCNTNCMSTHEKIAVAFRSLPFINLIKAAK 399
>Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical
protein C47G2.5a protein.
Length = 776
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 183 PLFR*IHGLRDATVVPTHGKLSISQNSVKFFNLINVLK 70
PL R I L + + TH K++++ S+ F NLI K
Sbjct: 362 PLLRLIIELCNTNCMSTHEKIAVAFRSLPFINLIKAAK 399
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 388 RNGTPLEVVCAGVDADNLSARIDR--ILAEHRQENPKINDHSDAFIKVLD--EYSESDNY 555
++GTP + C+ ++ N+S+ + + +++ K N +A ++ +D + S+SD
Sbjct: 1518 KSGTPFQTYCSSINQQNISSHTNELFLFLSMKKDKLKTNVFFNATVEFVDVPQSSQSD-- 1575
Query: 556 ELVCGDEI 579
+CG I
Sbjct: 1576 --ICGQVI 1581
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 388 RNGTPLEVVCAGVDADNLSARIDR--ILAEHRQENPKINDHSDAFIKVLD--EYSESDNY 555
++GTP + C+ ++ N+S+ + + +++ K N +A ++ +D + S+SD
Sbjct: 1518 KSGTPFQTYCSSINQQNISSHTNELFLFLSMKKDKLKTNVFFNATVEFVDVPQSSQSD-- 1575
Query: 556 ELVCGDEI 579
+CG I
Sbjct: 1576 --ICGQVI 1581
>Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical
protein T09A5.12 protein.
Length = 708
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 385 GRNGTPLEVVCAGVDADNLSARIDRILAEHRQEN 486
G G E++C G +A +++ ID ILA + +N
Sbjct: 630 GLGGGDDEILCGGEEASGVTSNIDGILAANLPDN 663
>AL021488-2|CAA16367.2| 378|Caenorhabditis elegans Hypothetical
protein Y45F10A.4 protein.
Length = 378
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 151 IAEAVNLS-KQRNTIFVVFIQGDNDLSDEMSSTL 249
+A A++L+ KQR+ + +FIQG D +DE + +
Sbjct: 122 LAVAIDLNEKQRDIVVPLFIQGFKDAADEAGTKI 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,161,323
Number of Sequences: 27780
Number of extensions: 304179
Number of successful extensions: 828
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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