Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19e21
         (478 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    23   1.3  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    23   1.3  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   3.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   3.9  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   3.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   3.9  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   5.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   6.8  

>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 285 PICLQYCQAGCVALL 241
           P+C++ C  GCV  L
Sbjct: 61  PLCIKICAPGCVCRL 75


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 285 PICLQYCQAGCVALL 241
           P+C++ C  GCV  L
Sbjct: 61  PLCIKICAPGCVCRL 75


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 221 FDLAYDYKSATHPAWQYWRQIGRTGISSVATYK 319
           +DL  +  +A    W+Y  +   T + +VAT K
Sbjct: 119 YDLLENVNNAARINWEYLDKYKPTPLGAVATEK 151


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 226 IKRGVRSYFLKMMELIGSDVSGVNLNVKVAVVT 128
           IKR V S +L++ +L+G       ++ KV V T
Sbjct: 321 IKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRT 353


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 226 IKRGVRSYFLKMMELIGSDVSGVNLNVKVAVVT 128
           IKR V S +L++ +L+G       ++ KV V T
Sbjct: 236 IKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRT 268


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 226 IKRGVRSYFLKMMELIGSDVSGVNLNVKVAVVT 128
           IKR V S +L++ +L+G       ++ KV V T
Sbjct: 555 IKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRT 587


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 151 NVKVAVVTGHFEVEAQHRHD 92
           N  ++ + G FEVE  H  D
Sbjct: 412 NATLSFLNGEFEVEPAHGED 431


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 116 FEVARHDRDLYIKVHPRHIRP 178
           F+  R D+D     HP H  P
Sbjct: 416 FDPERFDQDAMASRHPMHYLP 436


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,232
Number of Sequences: 438
Number of extensions: 3321
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)