Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19e20
(618 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.0
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 23 3.2
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 3.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 4.2
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 4.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 7.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 9.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 9.6
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.2 bits (50), Expect = 1.0
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 70 DKKLIKMVKLTFLISISVLTCNLILSVRVYKRADILKLREEVREMFQHA-YDSYLRYA 240
DK+L+ V+ T +++SVL +L D L+ EV + Q YD LRY+
Sbjct: 75 DKRLLPPVQGTLTVNVSVLLLSL-------ASPDESSLKYEVEFLLQQQWYDPRLRYS 125
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.2 bits (50), Expect = 1.0
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 70 DKKLIKMVKLTFLISISVLTCNLILSVRVYKRADILKLREEVREMFQHA-YDSYLRYA 240
DK+L+ V+ T +++SVL +L D L+ EV + Q YD LRY+
Sbjct: 75 DKRLLPPVQGTLTVNVSVLLLSL-------ASPDESSLKYEVEFLLQQQWYDPRLRYS 125
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.2 bits (50), Expect = 1.0
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 70 DKKLIKMVKLTFLISISVLTCNLILSVRVYKRADILKLREEVREMFQHA-YDSYLRYA 240
DK+L+ V+ T +++SVL +L D L+ EV + Q YD LRY+
Sbjct: 75 DKRLLPPVQGTLTVNVSVLLLSL-------ASPDESSLKYEVEFLLQQQWYDPRLRYS 125
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 436 YSSQTLKR*CLHQSVFSVVLYL 371
Y + R C+H +VFSV+ +L
Sbjct: 29 YLVRAFCRNCIHPTVFSVLFWL 50
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 436 YSSQTLKR*CLHQSVFSVVLYL 371
Y + R C+H +VFSV+ +L
Sbjct: 477 YLVRAFCRNCIHPTVFSVLFWL 498
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 67 KDKKLIKMVKLTFLISISV 123
KDK ++ MVKLT +S ++
Sbjct: 147 KDKTILYMVKLTLKLSCAM 165
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.2 bits (45), Expect = 4.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 452 PPTILIFVSNTETLMSASKCLFCSTISTT 366
PP +L+F NT L+ K ++TT
Sbjct: 149 PPQLLVFDLNTSQLLKQVKIPHDIAVNTT 177
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/36 (22%), Positives = 15/36 (41%)
Frame = +1
Query: 172 ILKLREEVREMFQHAYDSYLRYAYPYDELRPLSCDG 279
+ K Q D+ + +AY + ++ CDG
Sbjct: 460 LTKQNTAFENQLQFVSDAVMAFAYAFRDMHKELCDG 495
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 9.6
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +3
Query: 30 NYGKVYANVNKYKRQKTNKN--GQINLP 107
NY Y N N YK+ N N QI +P
Sbjct: 312 NYSNNYYNNNNYKKLYYNINYIEQIPIP 339
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 431 VSNTETLMSASKCLFCSTISTTRLN 357
VSN + L +A+ FC I ++N
Sbjct: 558 VSNEQFLNTAATLSFCEMIHNAQVN 582
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,587
Number of Sequences: 438
Number of extensions: 3116
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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