Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19e17
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 34 0.086
01_06_1763 + 39723596-39723691,39724030-39724672,39724773-397252... 31 0.61
07_03_1489 + 26933029-26933077,26933704-26933838,26934354-269344... 31 1.1
06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137 29 2.4
12_02_1149 - 26467252-26468319,26468452-26469147,26469263-264694... 29 3.2
02_01_0205 - 1379448-1379696,1379827-1379901,1379983-1380056,138... 29 3.2
08_02_1630 - 28371925-28372407,28372514-28372714,28372797-28374242 29 4.3
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 28 5.6
02_05_1120 + 34257504-34258294,34258483-34258571,34258616-342587... 28 5.6
02_05_0274 - 27371048-27371203,27371750-27371779,27372018-273721... 28 5.6
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212... 28 7.5
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 28 7.5
04_01_0301 + 4016588-4016627,4016715-4018837 28 7.5
02_05_0936 - 32875479-32875573,32875794-32876028,32877752-328778... 28 7.5
11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090 27 9.9
04_04_0906 - 29297188-29297706 27 9.9
02_04_0591 - 24159654-24160155,24160233-24160316,24160898-241609... 27 9.9
01_06_0196 - 27410837-27413296 27 9.9
>08_02_1236 +
25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 34.3 bits (75), Expect = 0.086
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 103 IKMESNSDNENEIPIWQEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEILSSSV 276
+ + ++ E ++P + C GAP EIC EN + + + E Q+I S++V
Sbjct: 760 VPSQDDAQVEEDVPSQDDDNCPADGAPGEICSENANAFTTSSCVAETEYVQDIASTTV 817
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 241 LEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEE 378
+ E+Q+IL L ++L +E + R I KA +E+DA+ K EE
Sbjct: 1014 IHEQQKILKKDSDVLLTNLKSLEDKTRFIKKAFDDERDALRKLTEE 1059
>01_06_1763 + 39723596-39723691,39724030-39724672,39724773-39725275,
39725786-39725905,39726356-39726421,39727146-39727256,
39727650-39727726,39727996-39728063,39728384-39728497,
39728593-39728774,39728926-39728994,39729294-39729449,
39729657-39729734
Length = 760
Score = 31.5 bits (68), Expect = 0.61
Identities = 30/148 (20%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Frame = +1
Query: 118 NSDNENEIPIWQEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEILSSSVFSLTSHL 297
N+ ++ I ++P + A D + E +S + L + + E +SV S ++++
Sbjct: 572 NTSVTEKVNIIEKPSADKRDASTATEDLDTGESSSSETLTSAIDTVEDGETSV-SRSNNV 630
Query: 298 AQVEFRLRQILKAPPEEKDAMLKALEEFTSRGVSDTRAAPQGSSGEGA-CSECLQLERKI 474
A + L ++ + P ++ M+ + S + + E + CS+ +L + +
Sbjct: 631 ADFTY-LEEVSSSIPHDQLRMIDNINSLMSELAVEREELLRALRIESSNCSKLKELNKDL 689
Query: 475 RRQRSKQTHFIERLKSQLIELERFAANP 558
++ QTH +E L SQ + E P
Sbjct: 690 TQKLEIQTHRLELLSSQRMANENVLPKP 717
>07_03_1489 +
26933029-26933077,26933704-26933838,26934354-26934478,
26934558-26934626,26934730-26934798,26935095-26935157,
26935280-26936533
Length = 587
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 124 DNENEIPIWQEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQE 258
D++ IP+W P P G E ++ E E+ GD+ EEE+E
Sbjct: 451 DDKVGIPVWSPP--YPDGNNWEEEEDEEEEEEEGDKEEEAEEEEE 493
>06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137
Length = 542
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 271 SVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEEFTSRGVSDTRAA 414
+ FSL + ++E RLR + E DAM K +EE RG++ +AA
Sbjct: 442 ATFSL-DYALELEERLRARERDAAAEADAMRKEVEEKAQRGLAAAKAA 488
>12_02_1149 -
26467252-26468319,26468452-26469147,26469263-26469409,
26470936-26471274
Length = 749
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 148 WQEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEILSSSVFSLTSH 294
W+ P+ PLG+ + + N + S A+ E+E F+ TSH
Sbjct: 47 WKGPKASPLGSLRRVMHSNRTRLESAAEA-AVAWEEEFERVETFTATSH 94
>02_01_0205 -
1379448-1379696,1379827-1379901,1379983-1380056,
1380150-1380237,1380327-1380475,1380688-1380847,
1380933-1381088,1381177-1381365,1381481-1381714,
1381785-1382009,1382097-1382177
Length = 559
Score = 29.1 bits (62), Expect = 3.2
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Frame = +1
Query: 142 PIWQEPRCEPLGAPK-EICDE-NESEQNSGDRLHALEEE-QEILSSSVFSLTSHLAQVEF 312
P EPR E L E+ D+ E+E++ + LHALEE+ + V + + AQ++
Sbjct: 12 PFQMEPRREMLLQELGEMWDQIGEAEEDRREMLHALEEDCLNVYRVKVAQVKQYRAQLQ- 70
Query: 313 RLRQILKAPPEEKDAMLKALEEFTSRGVSDTRAAPQGSSGEGACSECLQLERKIRRQRSK 492
R+I + E E T+ ++ + G+ E S +LE RR+ +
Sbjct: 71 --REIADSVAEVAAICATIGEPSTTVHIACSSLQSTGNLKEELGSITPELEEMRRRREER 128
Query: 493 QTHFIE 510
+ F E
Sbjct: 129 RRKFSE 134
>08_02_1630 - 28371925-28372407,28372514-28372714,28372797-28374242
Length = 709
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +1
Query: 175 GAPKEICDENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKD 354
GAP + DE E + L +EQE SL++ A V RL + + P +
Sbjct: 63 GAPSSVLDELLWENRMEQAVEQLMQEQE-SGVLALSLSARKAMVADRLASVAEHPRTPRP 121
Query: 355 AMLKAL 372
+L+A+
Sbjct: 122 ELLRAV 127
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 28.3 bits (60), Expect = 5.6
Identities = 30/148 (20%), Positives = 61/148 (41%)
Frame = +1
Query: 199 ENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEE 378
+NE+E L L+ +++ + + TSH+AQ++ + + K E++ + + +
Sbjct: 301 KNEAETFMLKELLLLKWQEKATTLASDDATSHVAQLQENVADLEKNLASEREKIQHSSQT 360
Query: 379 FTSRGVSDTRAAPQGSSGEGACSECLQLERKIRRQRSKQTHFIERLKSQLIELERFAANP 558
+ A + E C ++ R+ K ++ LK ++ +LE
Sbjct: 361 LKEMESVYNKHAKRQEDLENNMKSCKDQFKEFERKDVKYREDLKHLKQKIKKLEDKTEKD 420
Query: 559 ATLNDGKHRNFIEHLKSEIDQSLEEGCP 642
+ D + +E S I Q LEE P
Sbjct: 421 TSKIDESTKE-VEESSSLIPQ-LEEEIP 446
>02_05_1120 +
34257504-34258294,34258483-34258571,34258616-34258713,
34259269-34259292,34259314-34259404,34259761-34259813,
34259933-34260151
Length = 454
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +1
Query: 337 PPEEKDAMLKALEEFTSRGVSDTRAAPQGSSGEGACSECLQLERKIRRQRSKQ 495
P D + + LE + RG R AP GSS +GA L L R S Q
Sbjct: 93 PVASIDDIRRQLESY--RGSLAARGAPPGSSPDGAAPSLLDLVRSTSSPTSPQ 143
>02_05_0274 -
27371048-27371203,27371750-27371779,27372018-27372194,
27372598-27372677,27373464-27373505,27373632-27373788,
27374028-27374074,27375205-27375445
Length = 309
Score = 28.3 bits (60), Expect = 5.6
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Frame = +1
Query: 154 EPRCEPLGAPK-EICDENESEQNSGDRL-----HALEEEQEILSSSVFSLTSHLAQVEFR 315
EP + A K +IC E +NSGD + A E + SV + A++
Sbjct: 110 EPSDTEVSAKKRKICSETPDIENSGDAVTYEKGDASETTGSVEKDSVSPHSKTKAELHTT 169
Query: 316 LRQILK---APPEEKDAMLKALEEFTSRGVSDTRAAPQGSSGEGACSECL 456
+ ++ E++D +K + RG+ +T Q + EG+ + L
Sbjct: 170 VSKLFLDFVKSKEDQDEPIKFAVGYNRRGIDETEMKGQKNGNEGSKQQTL 219
>09_04_0318 -
16620177-16620582,16620686-16620765,16620873-16621213,
16621298-16621559
Length = 362
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +1
Query: 370 LEEFTSRGVSDTRAAPQGSSGEGACSECLQLE-----RKIRRQRSKQTHFIE 510
+++F+ G+ AAP G G+ +CS + RK R +Q+ F+E
Sbjct: 139 MDDFSGHGLGGNDAAPGGGGGDRSCSRASDEDDGGSARKKLRLSKEQSAFLE 190
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 27.9 bits (59), Expect = 7.5
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 202 NESEQNSGDRLHALEEEQEILSS-SVFS--LTSHLAQVEFRLRQILKAPPEEKDAML-KA 369
N ++S D +H + +Q++L S SV S L LAQV+ + + LK PE+ +L K
Sbjct: 98 NVELKSSSDGVH--QTKQQVLDSISVMSTALEDQLAQVKLAIDEALKFVPEQVPTVLAKI 155
Query: 370 LEEFTSRGVS 399
+ S+ S
Sbjct: 156 SHDLRSKAAS 165
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +1
Query: 184 KEICDENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFR---LRQILKAPPEEKD 354
KE+ D + +E E + L S V ++ Q E + L QIL+ E KD
Sbjct: 336 KELEDLKRKFEELQTNKDLVEGENDKLQSEVLAIEEKYGQSEAKVKWLNQILRVVVEAKD 395
Query: 355 AMLKALE 375
A KA E
Sbjct: 396 AAAKACE 402
>02_05_0936 -
32875479-32875573,32875794-32876028,32877752-32877848,
32878863-32878927,32879506-32879571,32879735-32879842,
32880169-32880303,32880582-32880647,32881172-32881222,
32881312-32881386,32881834-32881896,32882694-32882783,
32882903-32883100,32883189-32883315,32883482-32884100,
32884228-32884265,32884651-32884718,32885056-32885100,
32885243-32885302,32885510-32885593,32885677-32885868,
32887361-32887663
Length = 959
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 157 PRCEPLGAPKEICDENESEQNSGDRLHALEEEQEILSSS 273
P+C+ L P E+ + SG LH L+ IL S
Sbjct: 388 PQCDTLERPDNCLSEDTTADQSGIELHELDSVPVILKES 426
>11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090
Length = 1037
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 146 FGKNQGVNHSAHQKKFA-MKMNLNRIQATDYMLWKKSRRYYHPLCSP*RLIWHKLSFVCD 322
F + NHS + FA ++ + N+ + W + + P CS LIWH + +C+
Sbjct: 716 FSSSVDDNHSLPRDFFATVQHDANKPAEAEEQYWSEIIQSGAPRCSHVILIWHIATSLCE 775
>04_04_0906 - 29297188-29297706
Length = 172
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 370 LEEFTSRGVSDTRAAPQGSSGEGACSECL 456
L SRG SD A+P G + C+ CL
Sbjct: 88 LRRRASRGGSDNMASPHGDTSADICTICL 116
>02_04_0591 -
24159654-24160155,24160233-24160316,24160898-24160944,
24161035-24161103,24161259-24161310,24161693-24161775,
24162312-24162422,24162808-24163211,24163308-24163380,
24163460-24163510,24163882-24164073,24164176-24164302,
24164753-24164934,24165023-24165226,24165738-24165836
Length = 759
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +1
Query: 289 SHLAQVEFRLRQI---LKAPPEEKDAMLKALEE 378
+ L ++E +LR + L++PP++ DA+LK + E
Sbjct: 2 AELGELEGKLRDVGEKLQSPPDDVDALLKLIHE 34
>01_06_0196 - 27410837-27413296
Length = 819
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -2
Query: 524 CDFNLSIKCVCLERCRLIFRSNWRHSLQAPSPELPC 417
C++ S++C CL ++ R +WR + P C
Sbjct: 295 CEYLPSLRCSCLPGYEMVDRRDWRRGCKPTFPVGNC 330
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,918,668
Number of Sequences: 37544
Number of extensions: 310135
Number of successful extensions: 1196
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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