Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19e17
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical pr... 36 0.033
AF003146-7|ABS83850.1| 340|Caenorhabditis elegans Hypothetical ... 35 0.058
AC006675-7|AAK84555.2| 409|Caenorhabditis elegans Hypothetical ... 31 0.71
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.94
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 31 0.94
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 30 1.2
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 29 2.2
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 29 2.9
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 29 2.9
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 3.8
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 3.8
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 3.8
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 3.8
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 3.8
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 28 6.7
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 28 6.7
U97016-8|AAB52350.2| 779|Caenorhabditis elegans Hypothetical pr... 28 6.7
U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to i... 28 6.7
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 6.7
U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical p... 28 6.7
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL132949-36|CAJ58501.1| 311|Caenorhabditis elegans Hypothetical... 27 8.8
AL132949-15|CAB70107.1| 340|Caenorhabditis elegans Hypothetical... 27 8.8
AL132949-14|CAB61086.2| 276|Caenorhabditis elegans Hypothetical... 27 8.8
AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical... 27 8.8
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 27 8.8
>U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical
protein T19D7.4 protein.
Length = 634
Score = 70.1 bits (164), Expect = 1e-12
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 6/144 (4%)
Frame = +1
Query: 217 NSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEEFTSRGV 396
N R+ LEEEQE L++S+FSL+SH AQV+FR++Q+ +A P ++ +L L++F +G
Sbjct: 61 NDALRVQQLEEEQERLNNSLFSLSSHFAQVQFRIKQMNEADPSDRLKLLSDLQKFAFKGC 120
Query: 397 SDTRAAPQGSSGEGACSECLQLERKIRRQRSKQTHFIERLKSQLIELERFAAN------P 558
+D + S + ++ L +Q +Q +++L+ Q+ +LER A P
Sbjct: 121 TDMNELQRLRSESESGNDVLD------KQNERQKELLKQLREQVEDLERTAYENGEGELP 174
Query: 559 ATLNDGKHRNFIEHLKSEIDQSLE 630
+T K + ++ L+ +I+ +L+
Sbjct: 175 STDILKKQKAVLDKLREKIELNLD 198
>Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical
protein C49F5.2 protein.
Length = 708
Score = 35.5 bits (78), Expect = 0.033
Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 10/180 (5%)
Frame = +1
Query: 121 SDNENEIPIWQEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEILSSSVFSLTSHLA 300
SD+++E+ IW+EPR P+ + + N S ++ + ++E I S S +
Sbjct: 25 SDDDDELTIWEEPRKSPISSNSYSDERNHSLSSTSN--SSVERSIIITISDDESEATERN 82
Query: 301 QVEFRLRQILKAPPEEKDAMLKALEEFTSR----GVSDTRAAPQGSSGEGACSECLQLER 468
Q E R I E++ +++ S+ V + + SS A + C R
Sbjct: 83 QQEVVDRAISNNLTEKRRRSVESFHRLHSKERKLEVKSRKKSRTSSSSMEASTSCTFPAR 142
Query: 469 KIRRQRSKQ------THFIERLKSQLIELERFAANPATLNDGKHRNFIEHLKSEIDQSLE 630
+ + +R K+ + F + EL NPA + D +H + E+ +++ E
Sbjct: 143 QTKTKRHKRKTYSTISSFAPHHSTICAELRN--VNPARIADFRHPSIFEYSDMSLNERRE 200
>AF003146-7|ABS83850.1| 340|Caenorhabditis elegans Hypothetical
protein F56F4.8 protein.
Length = 340
Score = 34.7 bits (76), Expect = 0.058
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +1
Query: 91 LTLLIKMESNSDNENEIPIWQEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEILSS 270
+TL ME DN + I + P P E++SE+ GD +EEE++ LSS
Sbjct: 59 ITLEQTMELPEDNLKDESIGSDNLSSPFMIP--YISESDSEEEEGDLTVLMEEEEKSLSS 116
Query: 271 SVFSLTSHLAQVEFRLRQILKAP 339
T +E+ L +I +AP
Sbjct: 117 GYD--TESEVDIEWELYKISRAP 137
>AC006675-7|AAK84555.2| 409|Caenorhabditis elegans Hypothetical
protein M02H5.5 protein.
Length = 409
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2
Query: 317 KRNSTCAK*DVKENTEDDNISCSSSKACNLSPEFCSDSFSSQISF 183
K+NSTC +V +DD ++C S +LS +CS + Q+ F
Sbjct: 245 KKNSTCESANVVLQIDDDLVACEQSIEIDLS--WCSSYKTEQLQF 287
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 30.7 bits (66), Expect = 0.94
Identities = 28/126 (22%), Positives = 55/126 (43%)
Frame = +1
Query: 151 QEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQIL 330
+E R L A +++ + ++ +L ALE + ++ SSV H ++ + L
Sbjct: 1681 EEFREHLLAAERKLAVAKQEQEELIVKLEALERARRVVESSVKEHQEHNNELNSQ-NVAL 1739
Query: 331 KAPPEEKDAMLKALEEFTSRGVSDTRAAPQGSSGEGACSECLQLERKIRRQRSKQTHFIE 510
A + D + L + + T + G A S+ +L +R ++ +Q+ +E
Sbjct: 1740 AAAKSQLDNEIALLNSDIAE--AHTELSASEDRGRRAASDAAKLAEDLRHEQ-EQSQQLE 1796
Query: 511 RLKSQL 528
R K QL
Sbjct: 1797 RFKKQL 1802
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 30.7 bits (66), Expect = 0.94
Identities = 28/126 (22%), Positives = 55/126 (43%)
Frame = +1
Query: 151 QEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQIL 330
+E R L A +++ + ++ +L ALE + ++ SSV H ++ + L
Sbjct: 1681 EEFREHLLAAERKLAVAKQEQEELIVKLEALERARRVVESSVKEHQEHNNELNSQ-NVAL 1739
Query: 331 KAPPEEKDAMLKALEEFTSRGVSDTRAAPQGSSGEGACSECLQLERKIRRQRSKQTHFIE 510
A + D + L + + T + G A S+ +L +R ++ +Q+ +E
Sbjct: 1740 AAAKSQLDNEIALLNSDIAE--AHTELSASEDRGRRAASDAAKLAEDLRHEQ-EQSQQLE 1796
Query: 511 RLKSQL 528
R K QL
Sbjct: 1797 RFKKQL 1802
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 30.7 bits (66), Expect = 0.94
Identities = 28/126 (22%), Positives = 55/126 (43%)
Frame = +1
Query: 151 QEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQIL 330
+E R L A +++ + ++ +L ALE + ++ SSV H ++ + L
Sbjct: 1681 EEFREHLLAAERKLAVAKQEQEELIVKLEALERARRVVESSVKEHQEHNNELNSQ-NVAL 1739
Query: 331 KAPPEEKDAMLKALEEFTSRGVSDTRAAPQGSSGEGACSECLQLERKIRRQRSKQTHFIE 510
A + D + L + + T + G A S+ +L +R ++ +Q+ +E
Sbjct: 1740 AAAKSQLDNEIALLNSDIAE--AHTELSASEDRGRRAASDAAKLAEDLRHEQ-EQSQQLE 1796
Query: 511 RLKSQL 528
R K QL
Sbjct: 1797 RFKKQL 1802
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.2
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Frame = +1
Query: 160 RCEPLGAPKEICDENESEQNSGDRLHALEEE-QEILSSSVFSLTSHLAQVEFRLRQILKA 336
+ E L + E CD + DR +EEE +E L V SL L + +++
Sbjct: 314 KIEDLHSQLEKCDRLQESLEKADRSRQIEEEHRERLELEVKSLYEKLQKSAEDRQKVETT 373
Query: 337 PPEEKDAMLKALEEFTSRGVSDTRAAPQGSSGEGACSECLQLERKIRRQRSKQTHFIERL 516
++D + +L + + T AP+ + E E E++ ++ K L
Sbjct: 374 LKLDRDRLEVSLVTMKKK-LESTPEAPE--NVEKLRKELRDSEKRRLSEKEKHQAITSEL 430
Query: 517 KSQLIELER 543
KS L LER
Sbjct: 431 KSALKRLER 439
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/134 (19%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Frame = +1
Query: 124 DNENEIPIWQEPRCE--PLGAPKEICDENESEQNSGDRLHALEEEQEILSSSVFSLTSHL 297
D+E++ Q+P + PL +E +E +S+ H ++E S+ T
Sbjct: 1162 DHEHQYNSQQQPEYQHQPLVQMQEQSNEQQSQVFQHQHQHQAQQELAENQGSMGMATQQQ 1221
Query: 298 AQVEFRLRQILKAPPEEKDAMLKALEEFTSRGVSDTRAAPQGSSGEGA--CSECLQLERK 471
+ +L+Q L+ PP+++ + + + + APQ + + Q +
Sbjct: 1222 QCRQSQLQQQLQQPPQQQMQIQQQYQNVGPSHIQRQNVAPQRVQQQPMQYAQQQQQPMMQ 1281
Query: 472 IRRQRSKQTHFIER 513
+ +QRS Q ++++
Sbjct: 1282 MAQQRSMQEQYVQQ 1295
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 29.1 bits (62), Expect = 2.9
Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 7/136 (5%)
Frame = +1
Query: 229 RLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEE--FTSRGVSD 402
R+ LEEE L F LTS L +V L Q + ++ + LEE F RG
Sbjct: 194 RIALLEEEVARLKKENFRLTSELQRVRSELDQETLLRIDNQNKVTTILEEIDFMKRGFET 253
Query: 403 TRAAPQGSSGEGACSECL-----QLERKIRRQRSKQTHFIERLKSQLIELERFAANPATL 567
Q + SE +L IR R++ F+ ++ L +
Sbjct: 254 ELKDLQAQAARDTTSENREYFKNELMNSIRDIRAEYDRFMAGNRNDLESWSQIRVQEINT 313
Query: 568 NDGKHRNFIEHLKSEI 615
+ I H + E+
Sbjct: 314 QTNRQNAEINHKRDEV 329
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 29.1 bits (62), Expect = 2.9
Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 7/136 (5%)
Frame = +1
Query: 229 RLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEE--FTSRGVSD 402
R+ LEEE L F LTS L +V L Q + ++ + LEE F RG
Sbjct: 194 RIALLEEEVARLKKENFRLTSELQRVRSELDQETLLRIDNQNKVTTILEEIDFMKRGFET 253
Query: 403 TRAAPQGSSGEGACSECL-----QLERKIRRQRSKQTHFIERLKSQLIELERFAANPATL 567
Q + SE +L IR R++ F+ ++ L +
Sbjct: 254 ELKDLQAQAARDTTSENREYFKNELMNSIRDIRAEYDRFMAGNRNDLESWSQIRVQEINT 313
Query: 568 NDGKHRNFIEHLKSEI 615
+ I H + E+
Sbjct: 314 QTNRQNAEINHKRDEV 329
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 29.1 bits (62), Expect = 2.9
Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 7/136 (5%)
Frame = +1
Query: 229 RLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEE--FTSRGVSD 402
R+ LEEE L F LTS L +V L Q + ++ + LEE F RG
Sbjct: 194 RIALLEEEVARLKKENFRLTSELQRVRSELDQETLLRIDNQNKVTTILEEIDFMKRGFET 253
Query: 403 TRAAPQGSSGEGACSECL-----QLERKIRRQRSKQTHFIERLKSQLIELERFAANPATL 567
Q + SE +L IR R++ F+ ++ L +
Sbjct: 254 ELKDLQAQAARDTTSENREYFKNELMNSIRDIRAEYDRFMAGNRNDLESWSQIRVQEINT 313
Query: 568 NDGKHRNFIEHLKSEI 615
+ I H + E+
Sbjct: 314 QTNRQNAEINHKRDEV 329
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
T06E4.1 protein.
Length = 1295
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/93 (22%), Positives = 44/93 (47%)
Frame = +1
Query: 250 EQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEEFTSRGVSDTRAAPQGSS 429
E E+L S +L L+ + R ++ A +EKD +L+ ++ + + DT + Q
Sbjct: 776 ESEVLKESFEALQLELSASQEVSRSVVDAAVQEKDGLLRLVDTLKLK-IEDTEKSAQDLQ 834
Query: 430 GEGACSECLQLERKIRRQRSKQTHFIERLKSQL 528
+ + E QL+ ++ + + +E L +L
Sbjct: 835 -QSSVEEIKQLQLDLQNFK-QNAEVLESLNEKL 865
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 199 ENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEE 378
E +EQN GDR E + SS ++T +V+ +L ++K +++ A+ + LE+
Sbjct: 863 EKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQ-KLEDVVKEKEDKEIALRRDLED 921
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 91 LTLLIKMESNSDNENE--IPIWQEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEIL 264
L +++K S N E W E R + ++ + N+ N + LEE++ L
Sbjct: 1035 LAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNMRMKNVNLEEKKNEL 1094
Query: 265 SSSVFSLTSHLAQVEFRL 318
+V LT+ + Q+E +L
Sbjct: 1095 DQNVTDLTNKVRQLEIQL 1112
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 199 ENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEE 378
E +EQN GDR E + SS ++T +V+ +L ++K +++ A+ + LE+
Sbjct: 863 EKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQ-KLEDVVKEKEDKEIALRRDLED 921
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 91 LTLLIKMESNSDNENE--IPIWQEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEIL 264
L +++K S N E W E R + ++ + N+ N + LEE++ L
Sbjct: 1035 LAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNMRMKNVNLEEKKNEL 1094
Query: 265 SSSVFSLTSHLAQVEFRL 318
+V LT+ + Q+E +L
Sbjct: 1095 DQNVTDLTNKVRQLEIQL 1112
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 199 ENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEE 378
E +EQN GDR E + SS ++T +V+ +L ++K +++ A+ + LE+
Sbjct: 623 EKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQ-KLEDVVKEKEDKEIALRRDLED 681
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 91 LTLLIKMESNSDNENE--IPIWQEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEIL 264
L +++K S N E W E R + ++ + N+ N + LEE++ L
Sbjct: 795 LAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNMRMKNVNLEEKKNEL 854
Query: 265 SSSVFSLTSHLAQVEFRL 318
+V LT+ + Q+E +L
Sbjct: 855 DQNVTDLTNKVRQLEIQL 872
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 199 ENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEE 378
E +EQN GDR E + SS ++T +V+ +L ++K +++ A+ + LE+
Sbjct: 863 EKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQ-KLEDVVKEKEDKEIALRRDLED 921
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 91 LTLLIKMESNSDNENE--IPIWQEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEIL 264
L +++K S N E W E R + ++ + N+ N + LEE++ L
Sbjct: 1035 LAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNMRMKNVNLEEKKNEL 1094
Query: 265 SSSVFSLTSHLAQVEFRL 318
+V LT+ + Q+E +L
Sbjct: 1095 DQNVTDLTNKVRQLEIQL 1112
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +1
Query: 229 RLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEE--FTSRGVSD 402
R+ LEEE L F LTS L +V L Q + ++ + LEE F RG
Sbjct: 194 RIALLEEEVARLKKENFRLTSELQRVRIELDQETLLRIDNQNKVKTILEEIDFMKRGFET 253
Query: 403 TRAAPQGSSGEGACSE 450
Q + SE
Sbjct: 254 ELKELQAQAARDTTSE 269
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +1
Query: 229 RLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEE--FTSRGVSD 402
R+ LEEE L F LTS L +V L Q + ++ + LEE F RG
Sbjct: 194 RIALLEEEVARLKKENFRLTSELQRVRIELDQETLLRIDNQNKVKTILEEIDFMKRGFET 253
Query: 403 TRAAPQGSSGEGACSE 450
Q + SE
Sbjct: 254 ELKELQAQAARDTTSE 269
>U97016-8|AAB52350.2| 779|Caenorhabditis elegans Hypothetical
protein B0261.1 protein.
Length = 779
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +1
Query: 400 DTRAAPQGSSGEGACSECLQLERKIRRQRSKQTHFIERLKSQLIELERFAANPATLNDGK 579
+ A + + GE +E ++ + R Q++ + + + L Q ELER A N A LN
Sbjct: 338 EEEAQEKKAKGEYEKAEEKRIREQNRLQKATERNQAKELVKQAKELERDARNAAKLNMKA 397
Query: 580 HRNFIEHLKSEIDQ 621
+ KSE Q
Sbjct: 398 DKEARAQEKSETRQ 411
>U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 3 protein.
Length = 378
Score = 27.9 bits (59), Expect = 6.7
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +1
Query: 196 DENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALE 375
DE + E+NS + L +EEE+E + S +S +Q + + K+ EE+D + E
Sbjct: 284 DEEDEEENSSE-LSEIEEEEEEVKPVKKSKSS--SQSVGKRKNRPKSTSEEED---EGEE 337
Query: 376 EFTSRGVSDTRAAPQGSSGEGACSECLQLERK---IRRQRSKQT 498
E SR V++ A +G + E + E+K +RR+R K+T
Sbjct: 338 E--SRKVAED-AEEEGIDIDSEIREHAEKEKKDKNVRRRRPKKT 378
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 6.7
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 17/132 (12%)
Frame = +1
Query: 196 DENESEQNSGDR------LHALEEEQEILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDA 357
+E ++E+N+ +R + LEE+ E + L V+ RLR + + E +DA
Sbjct: 933 EEQQNEKNNDERRKQMETVRDLEEQLEQEEQARQKLLLDKTNVDQRLRNLEERLVELQDA 992
Query: 358 MLKALEE----------FTSRGVSDTRAAPQGSSGEGACSECL-QLERKIRRQRSKQTHF 504
K L+E T++ + A G +G L +LE+ + R+R ++
Sbjct: 993 YDKLLKEKRLLEEKVEGLTTQLLDHEERAKHGVKAKGRLENQLHELEQDLNRERQYKSEL 1052
Query: 505 IERLKSQLIELE 540
+ + L ELE
Sbjct: 1053 EQHKRKLLAELE 1064
>U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical
protein F25B5.2 protein.
Length = 757
Score = 27.9 bits (59), Expect = 6.7
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 205 ESEQNSGDRLHALEEEQ-EILSSSVFSLTSHLAQVEFRLRQILKAPPEEKDAMLKALEEF 381
ES + G H ++E+ I S+SVF S + LR ++ PE +D M AL F
Sbjct: 153 ESRMSIGS-CHTIDEDSASIGSTSVFCTPSRNPLMRNGLRMSTRSVPENQDDMPPAL--F 209
Query: 382 TSRGVSDTRAAPQGSSGEG 438
S S R P S G
Sbjct: 210 RSLCNSAVRRVPTSKSEGG 228
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 KEICDENESE-QNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQ 324
+E ENE +N RLH LE+E + +FS+ L +L +
Sbjct: 133 QEDLKENEIRIENLNSRLHKLEDELSAKTHEIFSIGEELKNKTMKLNE 180
>AL132949-36|CAJ58501.1| 311|Caenorhabditis elegans Hypothetical
protein Y53F4B.42 protein.
Length = 311
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +1
Query: 151 QEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQVEFRLRQIL 330
++P+C P G D E N+ D + E+QE V S E +R +L
Sbjct: 16 EKPKCNPFGTRFLTDDTKVFEHNAWDDVEWSPEQQEEAQRIVQGQKSMKVDEEKAMR-LL 74
Query: 331 KAPPEEKDA 357
P ++ DA
Sbjct: 75 STPADQWDA 83
>AL132949-15|CAB70107.1| 340|Caenorhabditis elegans Hypothetical
protein Y53F4B.17 protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 124 DNENEIPIWQEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQ 303
+ E + EP EPL + + + S+Q D + A ++ + + SV ++T HL +
Sbjct: 238 EREGSGEVVAEPEAEPLESSEPRHQKRPSDQRPSDDVIASKKARTLHHFSVVNITVHLPE 297
>AL132949-14|CAB61086.2| 276|Caenorhabditis elegans Hypothetical
protein Y53F4B.16 protein.
Length = 276
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 124 DNENEIPIWQEPRCEPLGAPKEICDENESEQNSGDRLHALEEEQEILSSSVFSLTSHLAQ 303
+ E + EP EPL + + + S+Q D + A ++ + + SV ++T HL +
Sbjct: 71 EREGSGEVVAEPEAEPLESSEPRHQKRPSDQRPSDDVIASKKARTLHHFSVVNITVHLPE 130
>AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical
protein Y105C5A.17 protein.
Length = 337
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -2
Query: 302 CAK*DVKENTEDDNISCSSSKACNLSPEFCSDSFSS 195
C K+N + N+ C CN F FSS
Sbjct: 205 CTSAGCKKNADGSNVCCCQGYLCNSGMSFSKTEFSS 240
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 121 SDNENEIPIWQEPRCEPLGAPKEICDENESEQNSGD 228
SD+E E+ ++ P PK+ + ESE++SGD
Sbjct: 337 SDSEEEVVEVKKNSKSPKKTPKKTAVKEESEESSGD 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,152,651
Number of Sequences: 27780
Number of extensions: 291881
Number of successful extensions: 1168
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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