Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19e17
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    29   0.030
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                25   0.48 
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   3.4  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   4.5  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   4.5  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   4.5  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   6.0  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   6.0  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   6.0  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   7.9  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 29.5 bits (63), Expect = 0.030
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +1

Query: 406 RAAPQGSSGEGACSECLQLERKIRRQRSKQTHFIERLKSQLIELERFAANPATLNDGKHR 585
           R +P  S          Q  +   +++SK  H   +   +L +LE  + N   +ND K  
Sbjct: 35  RRSPSSSRSPSPSLLTSQPHQDHNKEKSKNNHHCNQDTEKLNQLEIESDNSKEVNDKKEE 94

Query: 586 NFI-EHLKSEI 615
           NFI + L++++
Sbjct: 95  NFIVDRLRNDL 105


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = +1

Query: 508 ERLKSQLIELERFAANPATLNDGKHRNFIEHLKSEIDQSLEEGCPLS 648
           E++ +++I+ E+++     LN  KH +F++H        +E+G  LS
Sbjct: 89  EQVAAKIIQTEKYSN---MLNSEKHASFLKHSNIVKVLMIEQGASLS 132


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 479 RLIFRSNWRHSLQAPSPELPCGAALVSD 396
           RL   SNW+  L    P+ P GA + S+
Sbjct: 86  RLSEVSNWKVLLLEAGPDEPAGAEIPSN 113


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 124 DNENEIPIWQEPRCEPLGAPKEICDENESEQNS 222
           DN+ EI +  E + +P GA K+   +N  ++ S
Sbjct: 95  DNKPEIWVLLEAKYDPTGAYKQHYLQNRVKEES 127


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 286 SRRTQRMIISPALLPKHVIC 227
           SR T+RMI +   L  H++C
Sbjct: 278 SRSTERMIAASVNLICHILC 297


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 124 DNENEIPIWQEPRCEPLGAPKEICDENESEQNS 222
           DN+ EI +  E + +P GA K+   +N  ++ S
Sbjct: 95  DNKPEIWVLLEAKYDPTGAYKQHYLQNRVKEES 127


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 349 KDAMLKALEEFTSRGVSD 402
           K  +L ALEE   RGV D
Sbjct: 192 KKIILDALEELDKRGVMD 209


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 349 KDAMLKALEEFTSRGVSD 402
           K  +L ALEE   RGV D
Sbjct: 192 KKIILDALEELDKRGVMD 209


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 349 KDAMLKALEEFTSRGVSD 402
           K  +L ALEE   RGV D
Sbjct: 192 KKIILDALEELDKRGVMD 209


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -1

Query: 486 ALPPYLSF*LEALATSSFTGASLRSCSCIRHSTRSELF 373
           AL P+LS  +  +  ++ T ++L    C+  + + +LF
Sbjct: 1   ALSPFLSSSVSTVIVTALTPSTLGRFPCLLLNGKXDLF 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,717
Number of Sequences: 438
Number of extensions: 3281
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)