Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19e10
         (659 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69384-5|CAA93419.2|  408|Caenorhabditis elegans Hypothetical pr...   250   5e-67
Z81485-3|CAB03977.1|  258|Caenorhabditis elegans Hypothetical pr...    32   0.31 
AF016414-6|AAG24022.1|  323|Caenorhabditis elegans Serpentine re...    29   2.2  
AF016447-8|AAG24010.1|  189|Caenorhabditis elegans Hypothetical ...    28   5.1  
AF016654-8|AAB66025.2|  331|Caenorhabditis elegans Hypothetical ...    28   6.8  

>Z69384-5|CAA93419.2|  408|Caenorhabditis elegans Hypothetical
           protein T11G6.8 protein.
          Length = 408

 Score =  250 bits (613), Expect = 5e-67
 Identities = 104/176 (59%), Positives = 138/176 (78%), Gaps = 4/176 (2%)
 Frame = +2

Query: 143 MATSKST-NTYNRQNWEDADFPILCQTCLGDNPYIRMTKEKYGKECKICSRPFTVFRWCP 319
           M+ SKS+ + YNR+NWED+DFPILC+TCLG+NPY+RM K+KYG+ECKIC RPFT FRW P
Sbjct: 1   MSMSKSSYSQYNRKNWEDSDFPILCETCLGNNPYMRMMKDKYGRECKICERPFTTFRWQP 60

Query: 320 GARMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDAALKVQDDLPRNEVNKEYYIQ 499
           G   R+K TE+CQTC+K+KNVCQTC+ DLEYGLP+QVRD  L++ D++P+   N+++++Q
Sbjct: 61  GKGARYKNTELCQTCAKVKNVCQTCMFDLEYGLPVQVRDHELQIADNIPKQGANRDFFLQ 120

Query: 500 NLESQLSNSDPTQPTNSLKS---KGSSDLLVRLARTAPYYKRNRPHVCSFWVKGEC 658
           N+E  L   D TQP   + +   + + D L R+ RT PYYKRN PH+CSF+VKGEC
Sbjct: 121 NVERTLGQGDGTQPIAQIANNMDQAAHDRLRRMGRTQPYYKRNAPHICSFFVKGEC 176


>Z81485-3|CAB03977.1|  258|Caenorhabditis elegans Hypothetical
           protein C49F5.3 protein.
          Length = 258

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = +1

Query: 295 FHSVSMVSRSKNAFQENRNMSDLFETEKCLSNMFIGFGIWSANPSERC 438
           F SV+  S  K AF++N    DLFE E    ++   F I  ++ S+RC
Sbjct: 208 FTSVACESIRKGAFEKNETFDDLFEYETAYEDVL--FPIIQSSKSKRC 253


>AF016414-6|AAG24022.1|  323|Caenorhabditis elegans Serpentine
           receptor, class h protein211 protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 532 WIRVRQLTLQVLYVIFLVYFV 470
           W RVRQ +  +LY++ L YF+
Sbjct: 131 WKRVRQASFVILYIVALTYFI 151


>AF016447-8|AAG24010.1|  189|Caenorhabditis elegans Hypothetical
           protein C54F6.5 protein.
          Length = 189

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 43  YFCDLVACRNGKEVFCLIG*AALNL 117
           +FCD V CRN K   CL G + L++
Sbjct: 162 WFCDSVTCRNCKISSCLTGDSKLHV 186


>AF016654-8|AAB66025.2|  331|Caenorhabditis elegans Hypothetical
           protein C17A2.1 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +2

Query: 416 LPIQVRDAALKVQD--DLPRNEVNKEYYIQNLESQLSNSDPTQPTNSLKSKGSSDLLV 583
           LP   R+ + K  +  +LP NE+  ++Y++ +E  LS        N L ++  +DLL+
Sbjct: 103 LPNFTRENSHKFSEVLNLPNNEI-LQFYVKEVEKSLSLKKRNFSKNILNAESINDLLI 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,172,832
Number of Sequences: 27780
Number of extensions: 358724
Number of successful extensions: 902
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)