Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19e09
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36753-6|CAA85335.1| 103|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF292050-1|AAG41146.1| 103|Caenorhabditis elegans 2I146 protein. 42 3e-04
Z19157-3|CAA79566.3| 395|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z81485-11|CAJ21556.1| 449|Caenorhabditis elegans Hypothetical p... 28 7.1
Z81485-9|CAB03981.3| 498|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81067-2|CAB02977.1| 274|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL022275-4|CAJ21562.1| 449|Caenorhabditis elegans Hypothetical ... 28 7.1
AL022275-2|CAA18361.3| 498|Caenorhabditis elegans Hypothetical ... 28 7.1
AF100307-12|AAC68928.1| 338|Caenorhabditis elegans Hypothetical... 28 7.1
>Z36753-6|CAA85335.1| 103|Caenorhabditis elegans Hypothetical
protein T09A5.7 protein.
Length = 103
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +2
Query: 167 MNSIGEECTDLKKKYDDCFNTWFSERFL----KGDQDDSVCAGIFKIYQECVKNAMKQQ- 331
M+SI EC LK+ YD CF T F ++F+ + + C + +Y+ CV+ + Q
Sbjct: 6 MSSIFPECDHLKQIYDKCF-TEFFQKFITPNYRHQYAVNPCERLHDVYKRCVEERLATQR 64
Query: 332 --SIDFKEIDKDILGTENE 382
ID EI K+ L T+++
Sbjct: 65 PFEIDLDEIRKEYLNTDDD 83
>AF292050-1|AAG41146.1| 103|Caenorhabditis elegans 2I146 protein.
Length = 103
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +2
Query: 167 MNSIGEECTDLKKKYDDCFNTWFSERFL----KGDQDDSVCAGIFKIYQECVKNAMKQQ- 331
M+SI EC LK+ YD CF T F ++F+ + + C + +Y+ CV+ + Q
Sbjct: 6 MSSIFPECDHLKQIYDKCF-TEFFQKFITPNYRHQYAVNPCERLHDVYKRCVEERLATQR 64
Query: 332 --SIDFKEIDKDILGTENE 382
ID EI K+ L T+++
Sbjct: 65 PFEIDLDEIRKEYLNTDDD 83
>Z19157-3|CAA79566.3| 395|Caenorhabditis elegans Hypothetical
protein ZC84.4 protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = -1
Query: 461 YCNRLWV*RHRPIWVVSYYLHLVVFCIHFQCLRYPYLFL*NQCFAVSLHS*HILDKF*IF 282
+ NR+W+ + I ++SY++HL+ + C+ YP +F S H+ + D+ F
Sbjct: 275 FANRIWIMEKKSIIIISYFIHLLPY---ISCVAYPLIFTLLNRGIRSAHAKIVADQRRRF 331
Query: 281 QRKQNHLDRLLRTFPRT 231
+ + +RT RT
Sbjct: 332 RSLTDEASSQIRTAIRT 348
>Z81485-11|CAJ21556.1| 449|Caenorhabditis elegans Hypothetical
protein W06B3.2d protein.
Length = 449
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 233 FSERFLKGDQDDSVCAGIFKIYQ--ECVKNAMKQQSIDFKEIDKDILGTENEYK 388
+SE GD + + AG+F+ + E +KN S E+D++ +G N+Y+
Sbjct: 388 YSELHSGGDYNTWI-AGVFQSERSREIIKNEYSTSSYTSPELDREYIGHVNQYQ 440
>Z81485-9|CAB03981.3| 498|Caenorhabditis elegans Hypothetical
protein W06B3.2a protein.
Length = 498
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 233 FSERFLKGDQDDSVCAGIFKIYQ--ECVKNAMKQQSIDFKEIDKDILGTENEYK 388
+SE GD + + AG+F+ + E +KN S E+D++ +G N+Y+
Sbjct: 437 YSELHSGGDYNTWI-AGVFQSERSREIIKNEYSTSSYTSPELDREYIGHVNQYQ 489
>Z81067-2|CAB02977.1| 274|Caenorhabditis elegans Hypothetical
protein F23A7.3 protein.
Length = 274
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 532 LFHCKPIITEILVTAWNLKKLAKDIATGCGFKDTDQF 422
L+ K +TE+ ++ NL+ + + T C KDT F
Sbjct: 153 LYETKRELTEVRISLMNLEAEHRTLQTNCNRKDTQLF 189
>AL022275-4|CAJ21562.1| 449|Caenorhabditis elegans Hypothetical
protein W06B3.2d protein.
Length = 449
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 233 FSERFLKGDQDDSVCAGIFKIYQ--ECVKNAMKQQSIDFKEIDKDILGTENEYK 388
+SE GD + + AG+F+ + E +KN S E+D++ +G N+Y+
Sbjct: 388 YSELHSGGDYNTWI-AGVFQSERSREIIKNEYSTSSYTSPELDREYIGHVNQYQ 440
>AL022275-2|CAA18361.3| 498|Caenorhabditis elegans Hypothetical
protein W06B3.2a protein.
Length = 498
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 233 FSERFLKGDQDDSVCAGIFKIYQ--ECVKNAMKQQSIDFKEIDKDILGTENEYK 388
+SE GD + + AG+F+ + E +KN S E+D++ +G N+Y+
Sbjct: 437 YSELHSGGDYNTWI-AGVFQSERSREIIKNEYSTSSYTSPELDREYIGHVNQYQ 489
>AF100307-12|AAC68928.1| 338|Caenorhabditis elegans Hypothetical
protein T12B5.2 protein.
Length = 338
Score = 27.9 bits (59), Expect = 7.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1
Query: 425 IWVVSYYLHLVVFCIHFQC 369
IWV ++ ++V+C HF+C
Sbjct: 232 IWVSNFDSAIIVYCFHFKC 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,703,165
Number of Sequences: 27780
Number of extensions: 305517
Number of successful extensions: 745
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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