Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19e08
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
 Frame = +1

Query: 274 KLERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKD 453
           K E  +   K L   +KKM +A+     ++EP       L Q LS    + L K   +  
Sbjct: 255 KQELPDLNHKPLNLTIKKMPIAIVAPFTIVEPKLNKHEDLPQDLS----MKLSKNNDQCL 310

Query: 454 SQKKTDEALESIQKSIL----ALTTTVTENAKENKNTEVDSKLESYGNTL 591
              KT E   +++KS L     L   + +N  E KN    +     GN L
Sbjct: 311 DLSKTKET--NLEKSNLNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNKL 358


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
 Frame = +1

Query: 274 KLERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKD 453
           K E  +   K L   +KKM +A+     ++EP       L Q LS    + L K   +  
Sbjct: 147 KQELPDLNHKPLNLTIKKMPIAIVAPFTIVEPKLNKHEDLPQDLS----MKLSKNNDQCL 202

Query: 454 SQKKTDEALESIQKSIL----ALTTTVTENAKENKNTEVDSKLESYGNTL 591
              KT E   +++KS L     L   + +N  E KN    +     GN L
Sbjct: 203 DLSKTKET--NLEKSNLNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNKL 250


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -2

Query: 354 MFFIKCHQHLLHLFPKHLLSELMSLQFVFCCSYQMN*GHQH 232
           ++F  C    L+   +HLL EL        CS  ++ G +H
Sbjct: 459 LYFQLCEFSRLNFSVEHLLMELSRAIDSVACSKTVSDGIRH 499


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,785
Number of Sequences: 336
Number of extensions: 2323
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)