Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19e01
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         164   3e-42
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         164   3e-42
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         164   3e-42
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          160   5e-41
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   4.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   7.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.2  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  164 bits (398), Expect = 3e-42
 Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
 Frame = +2

Query: 98  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
           + + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 278 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 454
           GDEA    G  ++KYP+ HGIV +WD ME+      +  LR  PE+H  L+TE PLN   
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115

Query: 455 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 634
           NRE + +IMFE+FN P +Y+A+QAVL+L AS ++        TGIV+DSGDGV+H VP+ 
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIY 167

Query: 635 EGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
           EGY +   I  + +AGR++T ++  +L E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTE 196


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  164 bits (398), Expect = 3e-42
 Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
 Frame = +2

Query: 98  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
           + + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 278 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 454
           GDEA    G  ++KYP+ HGIV +WD ME+      +  LR  PE+H  L+TE PLN   
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115

Query: 455 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 634
           NRE + +IMFE+FN P +Y+A+QAVL+L AS ++        TGIV+DSGDGV+H VP+ 
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIY 167

Query: 635 EGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
           EGY +   I  + +AGR++T ++  +L E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTE 196


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  164 bits (398), Expect = 3e-42
 Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
 Frame = +2

Query: 98  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
           + + A V+D G+G  K GFAG+  P+ + PS         VG    + +   +   D ++
Sbjct: 4   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55

Query: 278 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 454
           GDEA    G  ++KYP+ HGIV +WD ME+      +  LR  PE+H  L+TE PLN   
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115

Query: 455 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 634
           NRE + +IMFE+FN P +Y+A+QAVL+L AS ++        TGIV+DSGDGV+H VP+ 
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIY 167

Query: 635 EGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
           EGY +   I  + +AGR++T ++  +L E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTE 196


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  160 bits (388), Expect = 5e-41
 Identities = 83/209 (39%), Positives = 124/209 (59%), Gaps = 1/209 (0%)
 Frame = +2

Query: 98  DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
           D   A V+D G+G  K GFAG+  P+ + PS         VG    + +   + + D ++
Sbjct: 4   DDAGALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGNKDAYV 55

Query: 278 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 454
           GDEA    G  ++KYP+ HGI+ +WD ME+      +  LR  PE+H  L+TE PLN   
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKS 115

Query: 455 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 634
           NRE + +IMFE+F  P +Y+A+QAVL+L AS ++        TG+V+DSGDGV+H VP+ 
Sbjct: 116 NREKMTQIMFETFAAPAVYVAIQAVLSLYASGRT--------TGVVLDSGDGVSHTVPIY 167

Query: 635 EGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
           EGY +   I  + +AGR++T ++  +L E
Sbjct: 168 EGYALPHAILRMDLAGRDLTDYLMKILTE 196


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 17/82 (20%), Positives = 31/82 (37%)
 Frame = +2

Query: 233  TRRMTKAVEDLDFFIGDEAFEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPED 412
            TR   + + D+  + G    E T +  +    HG   ++  +  + E    +     PE+
Sbjct: 958  TRWTHRIIRDISAWQGRRHGEMTFHLAQVLSGHGFFREYLAINGFTESPDCRSCAGVPEN 1017

Query: 413  HHFLMTEPPLNTPENREYLAEI 478
             H  + E P       EY  E+
Sbjct: 1018 AHHAIFECPRFARVRMEYFGEL 1039


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 4/25 (16%)
 Frame = +1

Query: 571 THLHWHRSRQRRWRY----SHCSSC 633
           T +HWH   QRR  Y     H S C
Sbjct: 376 TTIHWHGLHQRRTPYMDGVPHVSQC 400


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 93  WETIYQLVLSMSAP 134
           WE +YQLVL  + P
Sbjct: 388 WENLYQLVLRSAGP 401


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,224
Number of Sequences: 2352
Number of extensions: 15591
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)