Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19e01
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 342 2e-94
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 167 9e-42
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 167 9e-42
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 167 9e-42
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 167 9e-42
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 167 9e-42
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 167 9e-42
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 167 9e-42
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 166 2e-41
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 164 5e-41
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 153 9e-38
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 148 3e-36
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 148 5e-36
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 133 1e-31
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 105 3e-23
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 60 2e-09
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 60 2e-09
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 59 3e-09
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 56 2e-08
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 37 0.013
AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical ... 28 7.8
AC024793-2|AAT39976.1| 338|Caenorhabditis elegans Hypothetical ... 28 7.8
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 342 bits (840), Expect = 2e-94
Identities = 162/212 (76%), Positives = 181/212 (85%), Gaps = 6/212 (2%)
Frame = +2
Query: 104 LPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKE-TAKVGDQSTR---RMTKAVEDLDF 271
LPACVID GTGYTKLG+AGN EPQFIIPS IA+K+ A Q+ R R+ ++DLDF
Sbjct: 6 LPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDF 65
Query: 272 FIGDEAFE--ATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLN 445
FIGDEA AT Y+VKYP+RHGIVEDWDLMERY EQC+FKYLRAEPEDH FL+TEPPLN
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 446 TPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIV 625
TPENREY AEIMFESFNVPGLYIAVQAVLAL ASW SR + ER+ TG+V+DSGDGVTH +
Sbjct: 126 TPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCI 185
Query: 626 PVAEGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
PVA+GYVIGSCIKHIPIAGR+IT FIQSLLR+
Sbjct: 186 PVADGYVIGSCIKHIPIAGRDITYFIQSLLRD 217
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 167 bits (405), Expect = 9e-42
Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Frame = +2
Query: 98 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 278 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 454
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 455 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 634
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIY 167
Query: 635 EGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
EGY + I + +AGR++T ++ +L E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTE 196
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 167 bits (405), Expect = 9e-42
Identities = 87/209 (41%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Frame = +2
Query: 98 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 278 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 454
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 455 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 634
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHTVPIY 167
Query: 635 EGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
EGY + I + +AGR++T ++ +L E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTE 196
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 167 bits (405), Expect = 9e-42
Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Frame = +2
Query: 98 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 278 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 454
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 455 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 634
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIY 167
Query: 635 EGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
EGY + I + +AGR++T ++ +L E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTE 196
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 167 bits (405), Expect = 9e-42
Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Frame = +2
Query: 98 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 278 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 454
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 455 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 634
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIY 167
Query: 635 EGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
EGY + I + +AGR++T ++ +L E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTE 196
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 167 bits (405), Expect = 9e-42
Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Frame = +2
Query: 98 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 278 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 454
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 455 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 634
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIY 167
Query: 635 EGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
EGY + I + +AGR++T ++ +L E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTE 196
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 167 bits (405), Expect = 9e-42
Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Frame = +2
Query: 98 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 278 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 454
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 455 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 634
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIY 167
Query: 635 EGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
EGY + I + +AGR++T ++ +L E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTE 196
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 167 bits (405), Expect = 9e-42
Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Frame = +2
Query: 98 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 278 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 454
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 455 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 634
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIY 167
Query: 635 EGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
EGY + I + +AGR++T ++ +L E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTE 196
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 166 bits (403), Expect = 2e-41
Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Frame = +2
Query: 98 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
D + A ++D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALILDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 278 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 454
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 455 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 634
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHTVPIY 167
Query: 635 EGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
EGY + I + +AGR++T ++ +L E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTE 196
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 164 bits (399), Expect = 5e-41
Identities = 85/211 (40%), Positives = 126/211 (59%), Gaps = 1/211 (0%)
Frame = +2
Query: 92 MGDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDF 271
M + + A V+D G+G K GFAG+ P+ + PS VG + + + D
Sbjct: 1 MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDS 52
Query: 272 FIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNT 448
++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 53 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 112
Query: 449 PENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVP 628
NRE + +IMFE+FN P +Y+ +QAVL+L AS ++ TGIV+D+GDGVTH VP
Sbjct: 113 KSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRT--------TGIVLDTGDGVTHTVP 164
Query: 629 VAEGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
+ EGY + I+ + +AGR++T ++ +L E
Sbjct: 165 IYEGYALPHAIQRLDLAGRDLTDYMMKILTE 195
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 153 bits (372), Expect = 9e-38
Identities = 79/194 (40%), Positives = 116/194 (59%), Gaps = 1/194 (0%)
Frame = +2
Query: 143 KLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGY-SVKY 319
+ GFAG+ P+ + PS VG + + + D ++GDEA G ++KY
Sbjct: 5 RAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY 56
Query: 320 PVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNV 499
P+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN
Sbjct: 57 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 116
Query: 500 PGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIA 679
P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY + I + +A
Sbjct: 117 PAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 168
Query: 680 GRNITSFIQSLLRE 721
GR++T ++ +L E
Sbjct: 169 GRDLTDYLMKILTE 182
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 148 bits (359), Expect = 3e-36
Identities = 84/203 (41%), Positives = 124/203 (61%), Gaps = 2/203 (0%)
Frame = +2
Query: 116 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 295
VID G+G K GFAG ++P+ ++ VG R+ D D FIG +A
Sbjct: 12 VIDNGSGVIKAGFAGEQQPK--------VRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
Query: 296 ATG-YSVKYPVRHGIVEDWDLMERYIEQCVFK-YLRAEPEDHHFLMTEPPLNTPENREYL 469
G +S++YP+ HGIV +W ME+ E + L+ PE+H L+T+ PLN +NRE
Sbjct: 64 NRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERS 123
Query: 470 AEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVI 649
AEI FE+FNVP LYI +QAVL+L A+ ++ TG+V+DSGDGVTH VP+ +G+ +
Sbjct: 124 AEIFFETFNVPALYIQMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPIVKGFAM 175
Query: 650 GSCIKHIPIAGRNITSFIQSLLR 718
I+ + +AGR++T +++ LLR
Sbjct: 176 KHAIQRMDLAGRDVTEYLRVLLR 198
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 148 bits (358), Expect = 5e-36
Identities = 70/153 (45%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
Frame = +2
Query: 266 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 442
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 8 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 67
Query: 443 NTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHI 622
N NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH
Sbjct: 68 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHT 119
Query: 623 VPVAEGYVIGSCIKHIPIAGRNITSFIQSLLRE 721
VP+ EGY + I + +AGR++T ++ +L E
Sbjct: 120 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 152
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 133 bits (321), Expect = 1e-31
Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 5/205 (2%)
Frame = +2
Query: 116 VIDVGTGYTKLGFAGNKEPQFIIPSTIA---IKETAKVGDQSTRRMTKAVEDLDFFIGDE 286
V+D GTG+ K G+AG P I PS + ++ T +VG+ +E D +G+E
Sbjct: 10 VVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGN---------IEIKDLMVGEE 60
Query: 287 AFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVF-KYLRAEPEDHHFLMTEPPLNTPENR 460
+ + YP+ +GIV +WD M + + L +P++ L+TEPPLN NR
Sbjct: 61 CSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNR 120
Query: 461 EYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEG 640
E + ++MFE + +Y+AVQAVL L A + TG+VVDSGDGVTHI PV EG
Sbjct: 121 EKMFQVMFEQYGFNSIYVAVQAVLTLYA--------QGLLTGVVVDSGDGVTHICPVYEG 172
Query: 641 YVIGSCIKHIPIAGRNITSFIQSLL 715
+ + + + IAGR+IT ++ LL
Sbjct: 173 FALHHLTRRLDIAGRDITKYLIKLL 197
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 105 bits (252), Expect = 3e-23
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 10/217 (4%)
Frame = +2
Query: 95 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETA--------KVGDQSTRRMTK 250
GD + V D G+ ++GFAG + P+ IPS IA++E + ++ +
Sbjct: 8 GDEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQ 67
Query: 251 AVEDLDFFIGDEAF--EATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFL 424
+ +FFIG +++ ++ G++EDW+L E+ +E L + P +H L
Sbjct: 68 TKREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVL 127
Query: 425 MTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSG 604
+E N RE L EIMFE F VP Y++ VL+ A ++ G++VDSG
Sbjct: 128 FSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTH--------GLMVDSG 179
Query: 605 DGVTHIVPVAEGYVIGSCIKHIPIAGRNITSFIQSLL 715
T +VPV +GY + + PI G IT + +L
Sbjct: 180 ATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQML 216
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +2
Query: 98 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 278 GDEAFEATG-YSVKYPVRHGIVEDWDLMER 364
GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +2
Query: 98 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 278 GDEAFEATG-YSVKYPVRHGIVEDWDLMER 364
GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +2
Query: 98 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 278 GDEAFEATG-YSVKYPVRHGIVEDWDLMER 364
GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +2
Query: 98 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 277
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 278 GDEAFEATG-YSVKYPVRHGIVEDWDLM 358
GDEA G ++KYP+ HGIV +WD M
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 581 TGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGRNITSFIQSLL 715
TG+VVD G+ V +IVPV +GYV+ S I IP + + +++ L
Sbjct: 322 TGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASL 365
>AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical
protein M70.4 protein.
Length = 822
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 416 DDLRVPHGDT*TRTVRCTFPLNPSLLRYRGAQDTLQSI 303
+DL +P G+ + +F L SL ++ G +DT S+
Sbjct: 418 EDLNIPQGNNWANPIHTSFCLPKSLHKWAGRRDTSSSM 455
>AC024793-2|AAT39976.1| 338|Caenorhabditis elegans Hypothetical
protein Y48G1BL.7 protein.
Length = 338
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 687 FLPAIGMCFIHDPITYPSATGTM 619
FL AI MCF+HDP T+ + T+
Sbjct: 96 FLTAI-MCFLHDPQTFKDSNRTL 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,518,627
Number of Sequences: 27780
Number of extensions: 358121
Number of successful extensions: 906
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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