Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19d16
         (659 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069045-1|AAH69045.1|  141|Homo sapiens NADH dehydrogenase (ubi...    59   1e-08
AJ539081-1|CAD62165.1|  141|Homo sapiens NADH-ubiquinone oxidore...    59   1e-08
AL591242-6|CAH73905.1| 2096|Homo sapiens protein ( Human DNA seq...    30   8.4  
AK131455-1|BAD18600.1| 1161|Homo sapiens protein ( Homo sapiens ...    30   8.4  

>BC069045-1|AAH69045.1|  141|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa protein.
          Length = 141

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
 Frame = +3

Query: 108 YYRYYDTPDGCDVMKKTLVTTRYGVITGLIMSTYDVLMYSQAVGFKAVMKRYMLHTIPLG 287
           + +Y+D PDG D  +K   TT    + GL  + Y V +       + V K    +T    
Sbjct: 6   FRQYWDIPDGTDCHRKAYSTTSIASVAGLTAAAYRVTLNPPGTFLEGVAK-VGQYTFTAA 64

Query: 288 LMGATFALVANGAQILREK-DDRLNYFLGGLACGPILGPYIGSY 416
            +GA F L    +  +REK DD LNYFLGG A G  LG    +Y
Sbjct: 65  AVGAVFGLTTCISAHVREKPDDPLNYFLGGCAGGLTLGARTHNY 108


>AJ539081-1|CAD62165.1|  141|Homo sapiens NADH-ubiquinone
           oxidoreductase subunit B14.7 protein.
          Length = 141

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
 Frame = +3

Query: 108 YYRYYDTPDGCDVMKKTLVTTRYGVITGLIMSTYDVLMYSQAVGFKAVMKRYMLHTIPLG 287
           + +Y+D PDG D  +K   TT    + GL  + Y V +       + V K    +T    
Sbjct: 6   FRQYWDIPDGTDCHRKAYSTTSIASVAGLTAAAYRVTLNPPGTFLEGVAK-VGQYTFTAA 64

Query: 288 LMGATFALVANGAQILREK-DDRLNYFLGGLACGPILGPYIGSY 416
            +GA F L    +  +REK DD LNYFLGG A G  LG    +Y
Sbjct: 65  AVGAVFGLTTCISAHVREKPDDPLNYFLGGCAGGLTLGARTHNY 108


>AL591242-6|CAH73905.1| 2096|Homo sapiens protein ( Human DNA sequence
            from clone RP11-446F17 on chromosome 6 Contains  the 5'
            end of the CYP39A1 gene for cytochrome P450 subfamily
            XXXIX  ).
          Length = 2096

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
 Frame = -1

Query: 656  TFIPLNSFSEHLILHVPCLLP---ACVF*IVKRIFAQSKIMSPAPNRVHVIGYIRNEH-- 492
            T   L S +E L   V  L P   AC F + KR+    K+  P  + V +  Y  + H  
Sbjct: 923  TIFALASINEELFNIVDLLTPFQSACHFLVEKRLARPVKLQKPLESSVQLHSYFYSTHDM 982

Query: 491  -VTAVDAVFLYHTDN 450
             + + + V++ H D+
Sbjct: 983  KIGSEELVYITHIDD 997


>AK131455-1|BAD18600.1| 1161|Homo sapiens protein ( Homo sapiens cDNA
            FLJ16609 fis, clone TESTI4011072, weakly  similar to Mus
            musculus tudor domain containing 1 (Tdrd1). ).
          Length = 1161

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
 Frame = -1

Query: 656  TFIPLNSFSEHLILHVPCLLP---ACVF*IVKRIFAQSKIMSPAPNRVHVIGYIRNEH-- 492
            T   L S +E L   V  L P   AC F + KR+    K+  P  + V +  Y  + H  
Sbjct: 923  TIFALASINEELFNIVDLLTPFQSACHFLVEKRLARPVKLQKPLESSVQLHSYFYSTHDM 982

Query: 491  -VTAVDAVFLYHTDN 450
             + + + V++ H D+
Sbjct: 983  KIGSEELVYITHIDD 997


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,599,400
Number of Sequences: 237096
Number of extensions: 1849622
Number of successful extensions: 3324
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3315
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)