Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19d14
         (666 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64844-5|AAM45362.1|  368|Caenorhabditis elegans Hypothetical pr...    32   0.42 
U64844-4|AAB18307.1|  376|Caenorhabditis elegans Hypothetical pr...    31   0.56 
U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical pr...    31   0.73 
AF078157-5|AAN84817.1|  379|Caenorhabditis elegans Hypothetical ...    29   3.9  
AC006680-10|AAK72297.2|  335|Caenorhabditis elegans Seven tm rec...    29   3.9  
Z77133-7|CAB00865.2|  735|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AL008868-4|CAO82021.1|  735|Caenorhabditis elegans Hypothetical ...    28   5.2  
AL110478-4|CAB54346.1|  546|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z93378-3|CAB07585.3|  749|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z81132-10|CAB03433.1|  320|Caenorhabditis elegans Hypothetical p...    27   9.1  
AL021447-4|CAB60285.3|  330|Caenorhabditis elegans Hypothetical ...    27   9.1  

>U64844-5|AAM45362.1|  368|Caenorhabditis elegans Hypothetical
           protein T22F3.2b protein.
          Length = 368

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +1

Query: 187 MKEFVKALDKNNASFEYLCKKIPRLSDAKIKEGVFDGPQIRSLMADEKFDVTMNNTE 357
           +KE ++AL   +  F Y C K  + SDA +K  +   PQI  LM   +F  ++ N+E
Sbjct: 224 IKELMQALFTESKIFGYNCSKCKKKSDAPVKPTLLRAPQI-LLMHISRF--SLKNSE 277


>U64844-4|AAB18307.1|  376|Caenorhabditis elegans Hypothetical
           protein T22F3.2a protein.
          Length = 376

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 187 MKEFVKALDKNNASFEYLCKKIPRLSDAKIKEGVFDGPQI 306
           +KE ++AL   +  F Y C K  + SDA +K  +   PQI
Sbjct: 224 IKELMQALFTESKIFGYNCSKCKKKSDAPVKPTLLRAPQI 263


>U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical protein
            T07F8.1 protein.
          Length = 822

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 17/138 (12%)
 Frame = +1

Query: 271  KIKEGVFDGPQIRSLMADEKFDVTMNNTESDAWL-----------AFKDAVNNFLGNNKH 417
            KI      G Q+R L+  E  D  +      +W+           +   A NN +  +  
Sbjct: 668  KINYQGLTGNQVRQLLRTENIDKVLKVFTDCSWIQNMRNFMNDLASLMSASNNAVFTDDD 727

Query: 418  -PDYKNKVANLLDKYQKLGCNMSI--KLHFLDSHVDFF---PDNLGDYSEEQGERFHQDI 579
              D+   + NL    + L  +M +  KLH L +H++ +       G  SE+  E FH   
Sbjct: 728  LNDFAKTLKNLKRNIRILHPSMGVTPKLHILCTHLEPYIRAKRTWGRTSEQGMEAFHVLF 787

Query: 580  KTMETRYQGQWNVNMMAD 633
            +T ETR+    ++ + A+
Sbjct: 788  RTTETRFSSVMSLKLRAE 805


>AF078157-5|AAN84817.1|  379|Caenorhabditis elegans Hypothetical
           protein F25E5.7 protein.
          Length = 379

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 19/74 (25%), Positives = 34/74 (45%)
 Frame = +1

Query: 325 EKFDVTMNNTESDAWLAFKDAVNNFLGNNKHPDYKNKVANLLDKYQKLGCNMSIKLHFLD 504
           ++FD+ M+ ++ D    F+D V   +  N  PD  +    +L+  + L  N SI    + 
Sbjct: 128 DRFDIIMDRSKFDMTRKFQDLVRRVIVINGCPDVNSAKVLILELKKPLELNPSIWPVCIS 187

Query: 505 SHVDFFPDNLGDYS 546
           +    F D   D+S
Sbjct: 188 NDPQLF-DRSSDFS 200


>AC006680-10|AAK72297.2|  335|Caenorhabditis elegans Seven tm
           receptor protein 41 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -1

Query: 114 FCSYFEIFTRIPLFLNVV 61
           F  +FE+FT++P+F+ +V
Sbjct: 4   FYDFFEVFTKVPIFITIV 21


>Z77133-7|CAB00865.2|  735|Caenorhabditis elegans Hypothetical
           protein K03A11.1 protein.
          Length = 735

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = +1

Query: 340 TMNNTESDAWLAFKDAVNNFLGNNKHPDYKNKVANLLDKYQKLGCNMSIKLHFLDSHVDF 519
           +M N  S + + FK + +NF G+  + +Y NK  N  D+      N SI   FL+  +  
Sbjct: 650 SMQNLPSTSEMQFKSSDDNFDGSFSNFEYDNK-ENEHDE-----ANESIDFGFLNEELKM 703

Query: 520 FPDN 531
            PD+
Sbjct: 704 IPDD 707


>AL008868-4|CAO82021.1|  735|Caenorhabditis elegans Hypothetical
           protein K03A11.1 protein.
          Length = 735

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = +1

Query: 340 TMNNTESDAWLAFKDAVNNFLGNNKHPDYKNKVANLLDKYQKLGCNMSIKLHFLDSHVDF 519
           +M N  S + + FK + +NF G+  + +Y NK  N  D+      N SI   FL+  +  
Sbjct: 650 SMQNLPSTSEMQFKSSDDNFDGSFSNFEYDNK-ENEHDE-----ANESIDFGFLNEELKM 703

Query: 520 FPDN 531
            PD+
Sbjct: 704 IPDD 707


>AL110478-4|CAB54346.1|  546|Caenorhabditis elegans Hypothetical
           protein Y26D4A.10 protein.
          Length = 546

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 439 ANLLDKYQKLGCNMSIKLHFLDSHVDFFPDNLGDYSEEQGE 561
           A++L+K  +   +   K+H  D H +F   N  DY  E  +
Sbjct: 491 ADILEKRARALEDQKCKIHPTDDHTNFSRSNFSDYPNEYAD 531


>Z93378-3|CAB07585.3|  749|Caenorhabditis elegans Hypothetical
           protein F19H8.4 protein.
          Length = 749

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 46  RARDKHYVQK*WNPRKNLKVGTKNVIRKKL 135
           RAR+++ VQ+ W PR+   + T  V   KL
Sbjct: 104 RAREQYKVQRKWQPRRPAAIPTTTVKTPKL 133


>Z81132-10|CAB03433.1|  320|Caenorhabditis elegans Hypothetical
           protein T26E4.12 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -1

Query: 240 QVFKTSIVFIQCFNELFHHTEF-DMKRR**NLFRTN*FFSYNVFCSYFEIFTRIPLFLNV 64
           QVF  S +F+  F  +   T+  D K    + +  + FF ++  CS F     +P +LNV
Sbjct: 228 QVFLPSFIFLGVFVFVGMFTQLIDPKI---SQYLVSVFFMFSPICSPFSYILFVPHYLNV 284

Query: 63  VL 58
           +L
Sbjct: 285 IL 286


>AL021447-4|CAB60285.3|  330|Caenorhabditis elegans Hypothetical
           protein F19B2.8 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 416 CLLFPRKLLTASLNASQASDSVLFIVTSNFSSAI 315
           CL+FP  +    +N  + S ++LF + SNF   +
Sbjct: 35  CLIFPCFVYLFKMNRERDSKTILFPILSNFYKVV 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,471,084
Number of Sequences: 27780
Number of extensions: 342506
Number of successful extensions: 993
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)