Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19d12
(481 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047079-1|AAH47079.1| 104|Homo sapiens Lyrm7 homolog (mouse) p... 80 5e-15
BC037930-1|AAH37930.1| 104|Homo sapiens Lyrm7 homolog (mouse) p... 79 6e-15
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 32 0.91
BC104668-1|AAI04669.1| 88|Homo sapiens LYR motif containing 2 ... 30 3.7
BC009782-1|AAH09782.1| 88|Homo sapiens LYR motif containing 2 ... 30 3.7
AK128446-1|BAC87444.1| 121|Homo sapiens protein ( Homo sapiens ... 30 3.7
BC094728-1|AAH94728.1| 731|Homo sapiens ring finger and WD repe... 29 8.5
AL590723-3|CAI14643.1| 731|Homo sapiens ring finger and WD repe... 29 8.5
AL590723-1|CAI14641.1| 491|Homo sapiens ring finger and WD repe... 29 8.5
AL513329-4|CAH72425.1| 731|Homo sapiens ring finger and WD repe... 29 8.5
AL513329-1|CAH72422.1| 491|Homo sapiens ring finger and WD repe... 29 8.5
AL359265-3|CAH71140.1| 731|Homo sapiens ring finger and WD repe... 29 8.5
AL359265-1|CAH71138.1| 491|Homo sapiens ring finger and WD repe... 29 8.5
AL162736-3|CAH73625.1| 731|Homo sapiens ring finger and WD repe... 29 8.5
AL162736-1|CAH73623.1| 491|Homo sapiens ring finger and WD repe... 29 8.5
AK095511-1|BAC04564.1| 120|Homo sapiens protein ( Homo sapiens ... 29 8.5
AF527539-1|AAQ08989.1| 731|Homo sapiens putative ubiquitin liga... 29 8.5
AF508940-1|AAM34692.1| 731|Homo sapiens constitutive photomorph... 29 8.5
>BC047079-1|AAH47079.1| 104|Homo sapiens Lyrm7 homolog (mouse)
protein.
Length = 104
Score = 79.8 bits (188), Expect = 5e-15
Identities = 43/93 (46%), Positives = 57/93 (61%)
Frame = +3
Query: 72 VLQSFKKLHRTRMKVFEGDERALLAARIKINEEFRKNKNVQNENSIKAMIAFGEDIEREL 251
VLQ FK LHRTR +VF+ D RAL AARIKINEEF+ NK+ + I+ ++ G DIE L
Sbjct: 7 VLQLFKTLHRTRQQVFKNDARALEAARIKINEEFKNNKSETSSKKIEELMKIGSDIELLL 66
Query: 252 RTQVIQAREIKPGVYEARITDDTVKLDNIPFND 350
RT VIQ + D + ++N+P+ D
Sbjct: 67 RTSVIQGIHTDHNTLKLVPRKDLL-VENVPYCD 98
>BC037930-1|AAH37930.1| 104|Homo sapiens Lyrm7 homolog (mouse)
protein.
Length = 104
Score = 79.4 bits (187), Expect = 6e-15
Identities = 42/93 (45%), Positives = 57/93 (61%)
Frame = +3
Query: 72 VLQSFKKLHRTRMKVFEGDERALLAARIKINEEFRKNKNVQNENSIKAMIAFGEDIEREL 251
VLQ FK LHRTR +VF+ D RAL AARIKINEEF+ NK+ + I+ ++ G D+E L
Sbjct: 7 VLQLFKTLHRTRQQVFKNDARALEAARIKINEEFKNNKSETSSKKIEELMKIGSDVELLL 66
Query: 252 RTQVIQAREIKPGVYEARITDDTVKLDNIPFND 350
RT VIQ + D + ++N+P+ D
Sbjct: 67 RTSVIQGIHTDHNTLKLVPRKDLL-VENVPYCD 98
>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
Length = 2663
Score = 32.3 bits (70), Expect = 0.91
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +3
Query: 126 DERALLAARIKINEEFRKNKNVQN-ENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEA 302
DE L + K ++E + + N +N +K + +D+E EL ++V RE + + +
Sbjct: 535 DEFEALERKTKKDQEMQLIHEISNLKNLVKHREVYNQDLENELSSKVELLREKEDQIKKL 594
Query: 303 RITDDTVKLDNI 338
+ D+ KL+NI
Sbjct: 595 QEYIDSQKLENI 606
>BC104668-1|AAI04669.1| 88|Homo sapiens LYR motif containing 2
protein.
Length = 88
Score = 30.3 bits (65), Expect = 3.7
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +3
Query: 72 VLQSFKKLHRTRMKVFEGDERALLAARIKINEEFRKNKNVQNENSIKAMIAFGEDIEREL 251
VL ++++ +T +V +R L + EEFR+NK+ E++I+ MI G +EL
Sbjct: 22 VLLLYRRILQTIRQVPNDSDRKYLKDWAR--EEFRRNKSATEEDTIRMMITQGNMQLKEL 79
Query: 252 RTQVIQAR 275
+ A+
Sbjct: 80 EKTLALAK 87
>BC009782-1|AAH09782.1| 88|Homo sapiens LYR motif containing 2
protein.
Length = 88
Score = 30.3 bits (65), Expect = 3.7
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +3
Query: 72 VLQSFKKLHRTRMKVFEGDERALLAARIKINEEFRKNKNVQNENSIKAMIAFGEDIEREL 251
VL ++++ +T +V +R L + EEFR+NK+ E++I+ MI G +EL
Sbjct: 22 VLLLYRRILQTIRQVPNDSDRKYLKDWAR--EEFRRNKSATEEDTIRMMITQGNMQLKEL 79
Query: 252 RTQVIQAR 275
+ A+
Sbjct: 80 EKTLALAK 87
>AK128446-1|BAC87444.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ46589 fis, clone THYMU3044188. ).
Length = 121
Score = 30.3 bits (65), Expect = 3.7
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -3
Query: 260 LSP*FPFYILSKCNHRFNRVFILNIFVFAKFFIYFYSCR**STFVAFEDFHSSSVQFL 87
+ P F + L + F+ +F L+ F+ FF +FY S+F F F S S+ FL
Sbjct: 1 MGPQFLSFFLFLPSFLFSFLFFLSFLFFSSFFSFFYFL---SSFPLFSFFLSFSLSFL 55
>BC094728-1|AAH94728.1| 731|Homo sapiens ring finger and WD repeat
domain 2 protein.
Length = 731
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 144 AARIKINEEF----RKNKNVQNENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEARIT 311
AA+++I EF R+NK Q E K + EDI+R E G+Y
Sbjct: 258 AAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV---------EEMSGLYSPVSE 308
Query: 312 DDTVKLDNIPFNDHAILEDGTEAPRP 389
D TV P H+ + D TE +P
Sbjct: 309 DSTVPQFEAPSPSHSSIIDSTEYSQP 334
>AL590723-3|CAI14643.1| 731|Homo sapiens ring finger and WD repeat
domain 2 protein.
Length = 731
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 144 AARIKINEEF----RKNKNVQNENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEARIT 311
AA+++I EF R+NK Q E K + EDI+R E G+Y
Sbjct: 258 AAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV---------EEMSGLYSPVSE 308
Query: 312 DDTVKLDNIPFNDHAILEDGTEAPRP 389
D TV P H+ + D TE +P
Sbjct: 309 DSTVPQFEAPSPSHSSIIDSTEYSQP 334
>AL590723-1|CAI14641.1| 491|Homo sapiens ring finger and WD repeat
domain 2 protein.
Length = 491
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 144 AARIKINEEF----RKNKNVQNENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEARIT 311
AA+++I EF R+NK Q E K + EDI+R E G+Y
Sbjct: 18 AAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV---------EEMSGLYSPVSE 68
Query: 312 DDTVKLDNIPFNDHAILEDGTEAPRP 389
D TV P H+ + D TE +P
Sbjct: 69 DSTVPQFEAPSPSHSSIIDSTEYSQP 94
>AL513329-4|CAH72425.1| 731|Homo sapiens ring finger and WD repeat
domain 2 protein.
Length = 731
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 144 AARIKINEEF----RKNKNVQNENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEARIT 311
AA+++I EF R+NK Q E K + EDI+R E G+Y
Sbjct: 258 AAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV---------EEMSGLYSPVSE 308
Query: 312 DDTVKLDNIPFNDHAILEDGTEAPRP 389
D TV P H+ + D TE +P
Sbjct: 309 DSTVPQFEAPSPSHSSIIDSTEYSQP 334
>AL513329-1|CAH72422.1| 491|Homo sapiens ring finger and WD repeat
domain 2 protein.
Length = 491
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 144 AARIKINEEF----RKNKNVQNENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEARIT 311
AA+++I EF R+NK Q E K + EDI+R E G+Y
Sbjct: 18 AAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV---------EEMSGLYSPVSE 68
Query: 312 DDTVKLDNIPFNDHAILEDGTEAPRP 389
D TV P H+ + D TE +P
Sbjct: 69 DSTVPQFEAPSPSHSSIIDSTEYSQP 94
>AL359265-3|CAH71140.1| 731|Homo sapiens ring finger and WD repeat
domain 2 protein.
Length = 731
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 144 AARIKINEEF----RKNKNVQNENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEARIT 311
AA+++I EF R+NK Q E K + EDI+R E G+Y
Sbjct: 258 AAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV---------EEMSGLYSPVSE 308
Query: 312 DDTVKLDNIPFNDHAILEDGTEAPRP 389
D TV P H+ + D TE +P
Sbjct: 309 DSTVPQFEAPSPSHSSIIDSTEYSQP 334
>AL359265-1|CAH71138.1| 491|Homo sapiens ring finger and WD repeat
domain 2 protein.
Length = 491
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 144 AARIKINEEF----RKNKNVQNENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEARIT 311
AA+++I EF R+NK Q E K + EDI+R E G+Y
Sbjct: 18 AAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV---------EEMSGLYSPVSE 68
Query: 312 DDTVKLDNIPFNDHAILEDGTEAPRP 389
D TV P H+ + D TE +P
Sbjct: 69 DSTVPQFEAPSPSHSSIIDSTEYSQP 94
>AL162736-3|CAH73625.1| 731|Homo sapiens ring finger and WD repeat
domain 2 protein.
Length = 731
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 144 AARIKINEEF----RKNKNVQNENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEARIT 311
AA+++I EF R+NK Q E K + EDI+R E G+Y
Sbjct: 258 AAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV---------EEMSGLYSPVSE 308
Query: 312 DDTVKLDNIPFNDHAILEDGTEAPRP 389
D TV P H+ + D TE +P
Sbjct: 309 DSTVPQFEAPSPSHSSIIDSTEYSQP 334
>AL162736-1|CAH73623.1| 491|Homo sapiens ring finger and WD repeat
domain 2 protein.
Length = 491
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 144 AARIKINEEF----RKNKNVQNENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEARIT 311
AA+++I EF R+NK Q E K + EDI+R E G+Y
Sbjct: 18 AAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV---------EEMSGLYSPVSE 68
Query: 312 DDTVKLDNIPFNDHAILEDGTEAPRP 389
D TV P H+ + D TE +P
Sbjct: 69 DSTVPQFEAPSPSHSSIIDSTEYSQP 94
>AK095511-1|BAC04564.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ38192 fis, clone FCBBF1000270. ).
Length = 120
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 478 FFYITFAVLFKIVLF*LALYIYYLVL 401
FF I A LFKI LF L LY+ ++ L
Sbjct: 11 FFKIIKAFLFKIALFYLGLYLIFMFL 36
>AF527539-1|AAQ08989.1| 731|Homo sapiens putative ubiquitin ligase
COP1 protein.
Length = 731
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 144 AARIKINEEF----RKNKNVQNENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEARIT 311
AA+++I EF R+NK Q E K + EDI+R E G+Y
Sbjct: 258 AAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV---------EEMSGLYSPVSE 308
Query: 312 DDTVKLDNIPFNDHAILEDGTEAPRP 389
D TV P H+ + D TE +P
Sbjct: 309 DSTVPQFEAPSPSHSSIIDSTEYSQP 334
>AF508940-1|AAM34692.1| 731|Homo sapiens constitutive
photomorphogenic protein protein.
Length = 731
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 144 AARIKINEEF----RKNKNVQNENSIKAMIAFGEDIERELRTQVIQAREIKPGVYEARIT 311
AA+++I EF R+NK Q E K + EDI+R E G+Y
Sbjct: 258 AAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV---------EEMSGLYSPVSE 308
Query: 312 DDTVKLDNIPFNDHAILEDGTEAPRP 389
D TV P H+ + D TE +P
Sbjct: 309 DSTVPQFEAPSPSHSSIIDSTEYSQP 334
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,444,375
Number of Sequences: 237096
Number of extensions: 1032661
Number of successful extensions: 5767
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5767
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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