Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19d10
         (703 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   2.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.9  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   6.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.5  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              22   6.5  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   8.6  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 681 VFNNIPKRDWWGR 643
           V NNI ++ WW R
Sbjct: 36  VVNNIKRKRWWSR 48


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 53  TFSSSITRLQRLLQFFIRILKQIKRTQS 136
           TFS+SI++L++ +    RIL   K  Q+
Sbjct: 92  TFSNSISQLRKEVSLLYRILLGAKDYQT 119


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 67  YNKTPKAVTIFYQNS*TDKKN 129
           +N  PK + +FY N  +D K+
Sbjct: 520 FNNVPKKLNMFYNNFNSDIKS 540


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 67  YNKTPKAVTIFYQNS*TDKKN 129
           +N  PK + +FY N  +D K+
Sbjct: 520 FNNVPKKLNMFYNNFNSDIKS 540


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 427 QYWKRSYATKFPSRKELNVPFWKGKFL 507
           QY+  +Y  + P    + VP + G FL
Sbjct: 101 QYYNINYIEQIPVPVPIPVPVYYGNFL 127


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 210 NRSLHFMRCSVS 175
           N+SLHF+R S+S
Sbjct: 33  NQSLHFVRASLS 44


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 210 NRSLHFMRCSVS 175
           N+SLHF+R S+S
Sbjct: 123 NQSLHFVRASLS 134


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 334 NKILQKDVDILMDLY 378
           N I++ DVDI  DLY
Sbjct: 55  NSIMKCDVDIRKDLY 69


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +1

Query: 103 QNS*TDKKNPVMKIPYLVSQNTREAYATSHEMKTSIAEAKRKIVAEDFEWDD 258
           QN  T +    MKI   + Q+ R      +E   +++   +KI+  DF ++D
Sbjct: 349 QNEETLQMIVSMKIMENLPQSGRINDPEGNEYMLALSNRMQKIINNDFNFND 400


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,544
Number of Sequences: 438
Number of extensions: 4482
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)