Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19d09
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   1.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   3.1  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   3.1  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.1  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
 Frame = -1

Query: 421  ISYKRNQHYAHSGSINRYQLASHFCISGPNARRPTRFQHSHFVFFLTTLFNVKNYS--HE 248
            + + +++H  +SG  N Y  A  F     + RR  +F  +       +  NV ++    E
Sbjct: 1343 VKHPKSRH-GYSGFYNEYNYAQPFVYYAGSQRRQEQFMRNAGAGIRNSDVNVYDFGIVFE 1401

Query: 247  ASESK-ESYFTTNLCCRPHLE-VIVNLFLLCVLHIASKLYVNLEPTLVYNKVLCWFSVNQ 74
              + K E  FTT     P  E   + +FL    +++S  +    P       +C+ + NQ
Sbjct: 1402 GKQQKAEFVFTTAYADSPVDEKERLLMFLSFSPYVSSSAFFEFIPFSGKQFQMCFSATNQ 1461


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 386  AMSIVLITFIGYQMDGGDSTQLWNPL 463
            A+S +++  IG  +    + Q WNPL
Sbjct: 2729 AISCIIMAIIGAYIGASAAAQSWNPL 2754


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -1

Query: 133 VNLEPTLVYNKVLCWFSVNQLTVTV*NRYYFCLKESSMKFKLL 5
           + L PT  Y++ + W+ ++ L +   N+  F L    MK  ++
Sbjct: 487 LQLNPTTDYSETVYWYGLDPLWMLATNKIIF-LNSFKMKLSII 528


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 532 DNFFNFNGHRHQHMDERFYITMARNNGI 615
           +N  N   H+HQH  ++  ++ A  NGI
Sbjct: 730 NNMLNMTHHQHQHQQQQQQLS-ADPNGI 756


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,746
Number of Sequences: 2352
Number of extensions: 13079
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)