Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19d09
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071466-1|AAL49088.1|  169|Drosophila melanogaster RE54605p pro...   103   3e-22
AE014297-2409|AAF55468.1|  169|Drosophila melanogaster CG7713-PA...   103   3e-22

>AY071466-1|AAL49088.1|  169|Drosophila melanogaster RE54605p
           protein.
          Length = 169

 Score =  103 bits (246), Expect = 3e-22
 Identities = 49/112 (43%), Positives = 63/112 (56%)
 Frame = +2

Query: 299 MTVLESCWSPCIWSTDTKMGSKLVAVYTTAMSIVLITFIGYQMDGGDSTQLWNPLFEADV 478
           M VL SCWSP IWS + + GS  VA YT A+S V+IT I Y + GG+S QL++PLFE D+
Sbjct: 1   MVVLSSCWSPIIWSDNVRTGSYAVAGYTAALSAVMITLISYMLAGGESAQLYSPLFETDI 60

Query: 479 RGXXXXXXXXXXXXXXXXXXXXXXMVIGINIWMRGFILPWLATMGFIIVFQF 634
           R                       +  GI I  RG++LPWL  +G  I+FQF
Sbjct: 61  RSSMPVAGGFFIIYFLLIILSSYLVYYGIKISTRGWLLPWLGLIGLAILFQF 112


>AE014297-2409|AAF55468.1|  169|Drosophila melanogaster CG7713-PA
           protein.
          Length = 169

 Score =  103 bits (246), Expect = 3e-22
 Identities = 49/112 (43%), Positives = 63/112 (56%)
 Frame = +2

Query: 299 MTVLESCWSPCIWSTDTKMGSKLVAVYTTAMSIVLITFIGYQMDGGDSTQLWNPLFEADV 478
           M VL SCWSP IWS + + GS  VA YT A+S V+IT I Y + GG+S QL++PLFE D+
Sbjct: 1   MVVLSSCWSPIIWSDNVRTGSYAVAGYTAALSAVMITLISYMLAGGESAQLYSPLFETDI 60

Query: 479 RGXXXXXXXXXXXXXXXXXXXXXXMVIGINIWMRGFILPWLATMGFIIVFQF 634
           R                       +  GI I  RG++LPWL  +G  I+FQF
Sbjct: 61  RSSMPVAGGFFIIYFLLIILSSYLVYYGIKISTRGWLLPWLGLIGLAILFQF 112


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,069,214
Number of Sequences: 53049
Number of extensions: 574467
Number of successful extensions: 1590
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1588
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)