Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19d08
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.48 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.4  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   7.8  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 201 HLTGVVKHWSSFRRASIKQQ 260
           HL+G   HW S RR S  Q+
Sbjct: 262 HLSGGTNHWDSGRRKSAAQR 281


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 509 PLMNKRKKNTRNENYSICNLPE 444
           P +N+R K T +   ++C  PE
Sbjct: 205 PAINRRLKETYSNMCALCEKPE 226


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 509 PLMNKRKKNTRNENYSICNLPE 444
           P +N+R K T +   ++C  PE
Sbjct: 205 PAINRRLKETYSNMCALCEKPE 226


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 509 PLMNKRKKNTRNENYSICNLPE 444
           P +N+R K T +   ++C  PE
Sbjct: 205 PAINRRLKETYSNMCALCEKPE 226


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +1

Query: 124 SDFTN*NHDEHFVKITLQSSKRYDSRISRVLSNIGAHFAAPVSSS 258
           S F N   DE FV +TL    R       VLS    +F   + S+
Sbjct: 20  SAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFRELLKST 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,885
Number of Sequences: 438
Number of extensions: 2720
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)