Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19d02
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 50 1e-06
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (... 45 6e-05
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 37 0.016
U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of c... 36 0.021
U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of c... 36 0.021
AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding p... 36 0.021
AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich ... 36 0.021
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF003132-2|AAB54134.2| 568|Caenorhabditis elegans Hypothetical ... 30 1.4
Z77666-11|CAJ76930.1| 142|Caenorhabditis elegans Hypothetical p... 29 2.4
Z77666-10|CAB01231.1| 176|Caenorhabditis elegans Hypothetical p... 29 2.4
U88165-9|AAK21394.1| 280|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 28 7.4
U28929-1|AAN63410.1| 418|Caenorhabditis elegans Hypothetical pr... 28 7.4
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 28 7.4
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 28 7.4
AL032658-1|CAA21743.2| 782|Caenorhabditis elegans Hypothetical ... 27 9.8
AL032627-17|CAA21550.1| 103|Caenorhabditis elegans Hypothetical... 27 9.8
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +1
Query: 376 SGDSTCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPKDVAS 555
SG +C C C T+ + C G L P LD RTT+L+L NN+++ + D S
Sbjct: 13 SGVISCQSGCKCPTKTTAV-----CKGSSLRSIPILLDPRTTVLDLSNNRISRLSADELS 67
Query: 556 -XXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEIP 681
SI L S LP L VL L +N L+ +P
Sbjct: 68 LYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLP 110
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +1
Query: 376 SGDSTCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPKDVAS 555
SG +C C C T+ + C G L P LD RTT+L+L NN+++ + D S
Sbjct: 13 SGVISCQSGCKCPTKTTAV-----CKGSSLRSIPILLDPRTTVLDLSNNRISRLSADELS 67
Query: 556 -XXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEIP 681
SI L S LP L VL L +N L+ +P
Sbjct: 68 LYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLP 110
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 385 STCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGI-PKDVASXX 561
+TCP CVC V C G LTE P + T L+LQ+N++T I P D +S
Sbjct: 15 ATCPAECVCVDR------TVSCVGQQLTEVPQNIPNDTIRLDLQDNEITKIGPNDFSSLM 68
Query: 562 XXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEIP 681
I+ + S S L L L+L NR+ +P
Sbjct: 69 NLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLP 108
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +1
Query: 313 SSAPLLEDVQLTANAEGTATQSGDSTCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDV 492
SS +L+D +T + G + TC +C + VDC GLT PT L
Sbjct: 230 SSIEILQDKFMTCS--GNRKRRYKKTCETAEICPLPCTCTGTTVDCRDSGLTYVPTNLPP 287
Query: 493 RTTILNLQNNKLTGIP 540
TT + L+ N+++ IP
Sbjct: 288 STTEIRLEQNQISSIP 303
Score = 35.9 bits (79), Expect = 0.028
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +1
Query: 370 TQSGDST-CPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIP-K 543
T S DS CP C C VV CS LT FP+ + TT L L N + IP
Sbjct: 669 TCSDDSNLCPPKCSCLDR------VVRCSNKNLTSFPSRIPFDTTELYLDANYINEIPAH 722
Query: 544 DVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRL 669
D+ ++ L+ + S L L+ L + N+L
Sbjct: 723 DLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKL 764
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 382 DSTCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGI 537
DS CP C C+ VDC+ GL PT + T L L N ++ +
Sbjct: 482 DSICPTQCDCY------GTTVDCNKRGLNTIPTSIPRFATQLLLSGNNISTV 527
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 385 STCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGI-PKDVASXX 561
+TCP CVC V C G LTE P + T L+LQ+N++T I P D +S
Sbjct: 15 ATCPAECVCVDR------TVSCVGQQLTEVPQNIPNDTIRLDLQDNEITKIGPNDFSSLM 68
Query: 562 XXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEIP 681
I+ + S S L L L+L NR+ +P
Sbjct: 69 NLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLP 108
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +1
Query: 313 SSAPLLEDVQLTANAEGTATQSGDSTCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDV 492
SS +L+D +T + G + TC +C + VDC GLT PT L
Sbjct: 230 SSIEILQDKFMTCS--GNRKRRYKKTCETAEICPLPCTCTGTTVDCRDSGLTYVPTNLPP 287
Query: 493 RTTILNLQNNKLTGIP 540
TT + L+ N+++ IP
Sbjct: 288 STTEIRLEQNQISSIP 303
Score = 35.9 bits (79), Expect = 0.028
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +1
Query: 370 TQSGDST-CPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIP-K 543
T S DS CP C C VV CS LT FP+ + TT L L N + IP
Sbjct: 669 TCSDDSNLCPPKCSCLDR------VVRCSNKNLTSFPSRIPFDTTELYLDANYINEIPAH 722
Query: 544 DVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRL 669
D+ ++ L+ + S L L+ L + N+L
Sbjct: 723 DLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKL 764
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 382 DSTCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGI 537
DS CP C C+ VDC+ GL PT + T L L N ++ +
Sbjct: 482 DSICPTQCDCY------GTTVDCNKRGLNTIPTSIPRFATQLLLSGNNISTV 527
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 406 VCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPKDVASXXXXXXXXXX 585
+CH G+ VVDCS L+E PT + T IL L +N++ I K
Sbjct: 28 LCHCVGN----VVDCSSLDLSEIPTTIPNNTRILLLSDNEIESIDKSRLKGFYFLQTLDI 83
Query: 586 XXSIM-GLDLGSVSELPGLTVLKLGNNRLIEIP 681
+I+ +D LP L +L + NRL IP
Sbjct: 84 SNNIIRHIDFEFFYNLPNLKILNIRKNRLARIP 116
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 406 VCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPKDVASXXXXXXXXXX 585
+CH G+ VVDCS L+E PT + T IL L +N++ I K
Sbjct: 28 LCHCVGN----VVDCSSLDLSEIPTTIPNNTRILLLSDNEIESIDKSRLKGFYFLQTLDI 83
Query: 586 XXSIM-GLDLGSVSELPGLTVLKLGNNRLIEIP 681
+I+ +D LP L +L + NRL IP
Sbjct: 84 SNNIIRHIDFEFFYNLPNLKILNIRKNRLARIP 116
>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
(drosophila peroxidase)homolog protein 1 protein.
Length = 1285
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 391 CPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPK-DVASXXXX 567
CP C C D VVDCS GLT P + L ++NN++ + + D+
Sbjct: 23 CPVECTC----DKKGLVVDCSSSGLTRIPKNISRNVRSLVIRNNRIHKLKRSDLEGFNQL 78
Query: 568 XXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEIP 681
I ++ + LP L L L +N L+ IP
Sbjct: 79 ETLVLTHNKIKIIEENVLDHLPELKRLSLAHNELVYIP 116
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 36.7 bits (81), Expect = 0.016
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Frame = +1
Query: 385 STCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPK-DVASXX 561
+ CP C C + V C G LT P + + TT L NN L + K + +
Sbjct: 15 TACPSECRC------AGLDVHCEGKNLTAIPGHIPIATTNLYFSNNLLNSLSKSNFQALP 68
Query: 562 XXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEIP 681
SI ++ + PGL L L N++ +P
Sbjct: 69 NLQYLDLSNNSIRDIEETLLDSFPGLKYLDLSWNKIRYVP 108
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 36.7 bits (81), Expect = 0.016
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Frame = +1
Query: 385 STCPKPCVCHTEGDSSNFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTGIPK-DVASXX 561
+ CP C C + V C G LT P + + TT L NN L + K + +
Sbjct: 15 TACPSECRC------AGLDVHCEGKNLTAIPGHIPIATTNLYFSNNLLNSLSKSNFQALP 68
Query: 562 XXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEIP 681
SI ++ + PGL L L N++ +P
Sbjct: 69 NLQYLDLSNNSIRDIEETLLDSFPGLKYLDLSWNKIRYVP 108
>U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of clr
protein 2, isoforma protein.
Length = 559
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 442 VDCSGYGLTEFPTPLDVRT--TILNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLG 615
+D S +T P+P+ T T L L NKLT +P ++ ++ L
Sbjct: 78 LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP-D 136
Query: 616 SVSELPGLTVLKLGNNRLIEIPT 684
S++ L L L L +N+L E+P+
Sbjct: 137 SLASLESLETLDLRHNKLTEVPS 159
>U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of clr
protein 2, isoformb protein.
Length = 558
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 442 VDCSGYGLTEFPTPLDVRT--TILNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLG 615
+D S +T P+P+ T T L L NKLT +P ++ ++ L
Sbjct: 77 LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP-D 135
Query: 616 SVSELPGLTVLKLGNNRLIEIPT 684
S++ L L L L +N+L E+P+
Sbjct: 136 SLASLESLETLDLRHNKLTEVPS 158
>AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding
protein SUR-8 protein.
Length = 559
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 442 VDCSGYGLTEFPTPLDVRT--TILNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLG 615
+D S +T P+P+ T T L L NKLT +P ++ ++ L
Sbjct: 78 LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP-D 136
Query: 616 SVSELPGLTVLKLGNNRLIEIPT 684
S++ L L L L +N+L E+P+
Sbjct: 137 SLASLESLETLDLRHNKLTEVPS 159
>AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich
repeat protein SOC-2 protein.
Length = 559
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 442 VDCSGYGLTEFPTPLDVRT--TILNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLG 615
+D S +T P+P+ T T L L NKLT +P ++ ++ L
Sbjct: 78 LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP-D 136
Query: 616 SVSELPGLTVLKLGNNRLIEIPT 684
S++ L L L L +N+L E+P+
Sbjct: 137 SLASLESLETLDLRHNKLTEVPS 159
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +1
Query: 403 CVCHTEGDSSNFVVDCSGYGLTEFPTPL-DVRTTILNLQNNKLTGIPKDVASXXXXXXXX 579
C+C E F+ D S ++ P L D+ L L NNK+T IP+ +
Sbjct: 116 CICSLE--QLTFI-DFSSNDISHLPDGLFDLPLKALILANNKITCIPEGIRRLAPTLAHL 172
Query: 580 XXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEIP 681
+ + + L L VLK+ NR+ + P
Sbjct: 173 DFSKNDIRSLQSQLRYLTSLEVLKISRNRVEDFP 206
>AF003132-2|AAB54134.2| 568|Caenorhabditis elegans Hypothetical
protein F37E3.2 protein.
Length = 568
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +1
Query: 475 PTPLDVRTTILNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKL 654
P+P T ++++N+ +T +PK +++ SI L V++LP + LKL
Sbjct: 166 PSPFINTITYIHIENSSITELPKWLSTSKSLSTVYLKGTSISSLT--PVAQLPAVKSLKL 223
Query: 655 GNNRLIE 675
+N LIE
Sbjct: 224 SHN-LIE 229
>Z77666-11|CAJ76930.1| 142|Caenorhabditis elegans Hypothetical
protein K08E7.8b protein.
Length = 142
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 460 GLTEFPTPLDVR---TTILNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLGSVSEL 630
G +FP ++ TILN+ NN+++ IP++VA+ I +L
Sbjct: 25 GFKKFPKKFVIKFPTATILNMANNEISEIPEEVATWTSLKGLNAAKNKISKFP-EPFLQL 83
Query: 631 PGLTVLKLGNNRLIEI 678
L L L N+L EI
Sbjct: 84 KNLIYLDLNGNQLEEI 99
>Z77666-10|CAB01231.1| 176|Caenorhabditis elegans Hypothetical
protein K08E7.8a protein.
Length = 176
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 460 GLTEFPTPLDVR---TTILNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLGSVSEL 630
G +FP ++ TILN+ NN+++ IP++VA+ I +L
Sbjct: 59 GFKKFPKKFVIKFPTATILNMANNEISEIPEEVATWTSLKGLNAAKNKISKFP-EPFLQL 117
Query: 631 PGLTVLKLGNNRLIEI 678
L L L N+L EI
Sbjct: 118 KNLIYLDLNGNQLEEI 133
>U88165-9|AAK21394.1| 280|Caenorhabditis elegans Hypothetical
protein F54C1.6 protein.
Length = 280
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 175 IKSDETPIPVETDNQFPPETNSE 243
I+ ET + VE DN+ PE NSE
Sbjct: 185 IEPSETSLKVEPDNEIVPEVNSE 207
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 EDVQLTA-NAEGTATQSGDSTCPKPCVCHTEGDSSNFVVDCS--GYGLTEFPTPLDVRTT 501
EDV +A N G Q+ S C EG S + C+ G LTEFP +
Sbjct: 178 EDVFCSATNRRGVNWQNTKSGTTSSAPC-PEGSSGKQLWACTEEGQWLTEFPNSAGCESN 236
Query: 502 ILNLQNNKLTGI 537
++ +N+ L+G+
Sbjct: 237 WISSRNSVLSGV 248
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 EDVQLTA-NAEGTATQSGDSTCPKPCVCHTEGDSSNFVVDCS--GYGLTEFPTPLDVRTT 501
EDV +A N G Q+ S C EG S + C+ G LTEFP +
Sbjct: 180 EDVFCSATNRRGVNWQNTKSGTTSSAPC-PEGSSGKQLWACTEEGQWLTEFPNSAGCESN 238
Query: 502 ILNLQNNKLTGI 537
++ +N+ L+G+
Sbjct: 239 WISSRNSVLSGV 250
>U28929-1|AAN63410.1| 418|Caenorhabditis elegans Hypothetical
protein F09C12.2 protein.
Length = 418
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -1
Query: 536 IPVSLLFCKFSIVVRTSKGVGNSVSPYPEQSTTKLLESPSV--WHT 405
+P + +F SI R +SP+ S +LLE P V WHT
Sbjct: 302 LPFTAMFPNASIEARNIVSKMLQISPWKRFSAEQLLEEPFVKHWHT 347
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 EDVQLTA-NAEGTATQSGDSTCPKPCVCHTEGDSSNFVVDCS--GYGLTEFPTPLDVRTT 501
EDV +A N G Q+ S C EG S + C+ G LTEFP +
Sbjct: 178 EDVFCSATNRRGVNWQNTKSGTTSSAPC-PEGSSGKQLWACTEEGQWLTEFPNSAGCESN 236
Query: 502 ILNLQNNKLTGI 537
++ +N+ L+G+
Sbjct: 237 WISSRNSVLSGV 248
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 EDVQLTA-NAEGTATQSGDSTCPKPCVCHTEGDSSNFVVDCS--GYGLTEFPTPLDVRTT 501
EDV +A N G Q+ S C EG S + C+ G LTEFP +
Sbjct: 180 EDVFCSATNRRGVNWQNTKSGTTSSAPC-PEGSSGKQLWACTEEGQWLTEFPNSAGCESN 238
Query: 502 ILNLQNNKLTGI 537
++ +N+ L+G+
Sbjct: 239 WISSRNSVLSGV 250
>AL032658-1|CAA21743.2| 782|Caenorhabditis elegans Hypothetical
protein Y76A2B.2 protein.
Length = 782
Score = 27.5 bits (58), Expect = 9.8
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 376 SGDSTCPKPCVCH 414
SG +TCP+ C+CH
Sbjct: 21 SGLTTCPRQCICH 33
>AL032627-17|CAA21550.1| 103|Caenorhabditis elegans Hypothetical
protein Y41C4A.13 protein.
Length = 103
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 334 DVQLTANAEGTATQSGDSTCPKPCVCHTEGDSSNF 438
DV+ N E T T+ GD+ CP P V G SS F
Sbjct: 22 DVKSAVN-EVTTTKDGDTYCPVPLVGTKCGTSSIF 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,119,329
Number of Sequences: 27780
Number of extensions: 263955
Number of successful extensions: 819
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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