Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19c23
(600 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031642-1|AAH31642.1| 526|Homo sapiens TBC1 domain family, mem... 115 1e-25
AK001944-1|BAA91992.1| 526|Homo sapiens protein ( Homo sapiens ... 115 1e-25
CR457186-1|CAG33467.1| 185|Homo sapiens Pfs2 protein. 31 2.3
BC062444-1|AAH62444.1| 185|Homo sapiens GINS complex subunit 2 ... 31 2.3
BC039580-1|AAH39580.1| 819|Homo sapiens PARP9 protein protein. 31 2.3
BC010164-1|AAH10164.1| 185|Homo sapiens GINS complex subunit 2 ... 31 2.3
BC003186-1|AAH03186.1| 185|Homo sapiens GINS complex subunit 2 ... 31 2.3
AK001275-1|BAA91595.1| 185|Homo sapiens protein ( Homo sapiens ... 31 2.3
AF307339-1|AAK07559.1| 819|Homo sapiens B aggressive lymphoma s... 31 2.3
AF307338-1|AAK07558.1| 854|Homo sapiens B aggressive lymphoma l... 31 2.3
AF201939-1|AAF86875.1| 185|Homo sapiens DC5 protein. 31 2.3
AF151880-1|AAD34117.1| 185|Homo sapiens CGI-122 protein protein. 31 2.3
AB209742-1|BAD92979.1| 359|Homo sapiens B aggressive lymphoma g... 31 2.3
BC052311-1|AAH52311.1| 571|Homo sapiens PR domain containing 14... 30 5.4
AK022595-1|BAB14120.1| 571|Homo sapiens protein ( Homo sapiens ... 30 5.4
AF319458-1|AAG39635.1| 571|Homo sapiens PR-domain containing pr... 30 5.4
AK223123-1|BAD96843.1| 185|Homo sapiens DNA replication complex... 30 7.1
BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance ... 29 9.4
AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance ... 29 9.4
AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated p... 29 9.4
>BC031642-1|AAH31642.1| 526|Homo sapiens TBC1 domain family, member
19 protein.
Length = 526
Score = 115 bits (276), Expect = 1e-25
Identities = 58/152 (38%), Positives = 87/152 (57%), Gaps = 8/152 (5%)
Frame = +2
Query: 146 KLAEEIKNLSIYKSFYNDVQKLVASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRT 325
++ +++K ++Y + P +K E K+ +++ K G + KL+N V+ +
Sbjct: 14 QIVQKLKGSNLYSQLERQAWASLQRPEIKLESLKEDIKEFFKISGWEKKLQNAVYSELSV 73
Query: 326 --------QSKQNKLDPLTSLSKASAQWEKRIHKSLNSMCSDLETSLAKIRPQSEQDELA 481
++ +PL + KA WEKRI KSLNSMC++L LA+ RP EQ EL
Sbjct: 74 FPLPSHPAAPPEHLKEPLVYMRKAQGSWEKRILKSLNSMCTELSIPLARKRPVGEQKELL 133
Query: 482 DKWNELSTYNLDLTKYRPVYAPKDFLEVLLTL 577
+KWNE+ T DL+ +RPVYAPKDFLEVL+ L
Sbjct: 134 NKWNEMGTDEPDLSLFRPVYAPKDFLEVLINL 165
>AK001944-1|BAA91992.1| 526|Homo sapiens protein ( Homo sapiens
cDNA FLJ11082 fis, clone PLACE1005206. ).
Length = 526
Score = 115 bits (276), Expect = 1e-25
Identities = 58/152 (38%), Positives = 87/152 (57%), Gaps = 8/152 (5%)
Frame = +2
Query: 146 KLAEEIKNLSIYKSFYNDVQKLVASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRT 325
++ +++K ++Y + P +K E K+ +++ K G + KL+N V+ +
Sbjct: 14 QIVQKLKGSNLYSQLERQAWASLQRPEIKLESLKEDIKEFFKISGWEKKLQNAVYSELSV 73
Query: 326 --------QSKQNKLDPLTSLSKASAQWEKRIHKSLNSMCSDLETSLAKIRPQSEQDELA 481
++ +PL + KA WEKRI KSLNSMC++L LA+ RP EQ EL
Sbjct: 74 FPLPSHPAAPPEHLKEPLVYMRKAQGSWEKRILKSLNSMCTELSIPLARKRPVGEQKELL 133
Query: 482 DKWNELSTYNLDLTKYRPVYAPKDFLEVLLTL 577
+KWNE+ T DL+ +RPVYAPKDFLEVL+ L
Sbjct: 134 NKWNEMGTDEPDLSLFRPVYAPKDFLEVLINL 165
>CR457186-1|CAG33467.1| 185|Homo sapiens Pfs2 protein.
Length = 185
Score = 31.5 bits (68), Expect = 2.3
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +2
Query: 188 FYNDVQKLV---ASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQSKQNKLDPLT 358
+Y ++ KL+ AS N+ K D +TL + M + + KLR + +VR Q KLD LT
Sbjct: 91 YYMELTKLLLNHASDNIPKADEIRTLVKDMWDTRI-AKLRVSADSFVRQQEAHAKLDNLT 149
Query: 359 SLSKASAQWEKRIHKSLNSMCSDLETSLAKIRPQSEQD 472
+ ++ + ++LN M L T+L + QD
Sbjct: 150 LMEINTS--GTFLTQALNHMYK-LRTNLQPLESTQSQD 184
>BC062444-1|AAH62444.1| 185|Homo sapiens GINS complex subunit 2
(Psf2 homolog) protein.
Length = 185
Score = 31.5 bits (68), Expect = 2.3
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +2
Query: 188 FYNDVQKLV---ASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQSKQNKLDPLT 358
+Y ++ KL+ AS N+ K D +TL + M + + KLR + +VR Q KLD LT
Sbjct: 91 YYMELTKLLLNHASDNIPKADEIRTLVKDMWDTRI-AKLRVSADSFVRQQEAHAKLDNLT 149
Query: 359 SLSKASAQWEKRIHKSLNSMCSDLETSLAKIRPQSEQD 472
+ ++ + ++LN M L T+L + QD
Sbjct: 150 LMEINTS--GTFLTQALNHMYK-LRTNLQPLESTQSQD 184
>BC039580-1|AAH39580.1| 819|Homo sapiens PARP9 protein protein.
Length = 819
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +2
Query: 101 VMDGVKEEVIHQTALKLAEEIKNLSIYKSFYNDVQKLVASPNVKKEDFKQTLQQAMKEKG 280
V+ K+ V HQ +K +L IYK+F +++ K ++ Q+ ++ +E G
Sbjct: 415 VLTFAKDHVKHQLTVKFVIFPTDLEIYKAFSSEMAKRSKMLSLNNYSVPQSTREEKRENG 474
Query: 281 LDTK 292
L+ +
Sbjct: 475 LEAR 478
>BC010164-1|AAH10164.1| 185|Homo sapiens GINS complex subunit 2
(Psf2 homolog) protein.
Length = 185
Score = 31.5 bits (68), Expect = 2.3
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +2
Query: 188 FYNDVQKLV---ASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQSKQNKLDPLT 358
+Y ++ KL+ AS N+ K D +TL + M + + KLR + +VR Q KLD LT
Sbjct: 91 YYMELTKLLLNHASDNIPKADEIRTLVKDMWDTRI-AKLRVSADSFVRQQEAHAKLDNLT 149
Query: 359 SLSKASAQWEKRIHKSLNSMCSDLETSLAKIRPQSEQD 472
+ ++ + ++LN M L T+L + QD
Sbjct: 150 LMEINTS--GTFLTQALNHMYK-LRTNLQPLESTQSQD 184
>BC003186-1|AAH03186.1| 185|Homo sapiens GINS complex subunit 2
(Psf2 homolog) protein.
Length = 185
Score = 31.5 bits (68), Expect = 2.3
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +2
Query: 188 FYNDVQKLV---ASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQSKQNKLDPLT 358
+Y ++ KL+ AS N+ K D +TL + M + + KLR + +VR Q KLD LT
Sbjct: 91 YYMELTKLLLNHASDNIPKADEIRTLVKDMWDTRI-AKLRVSADSFVRQQEAHAKLDNLT 149
Query: 359 SLSKASAQWEKRIHKSLNSMCSDLETSLAKIRPQSEQD 472
+ ++ + ++LN M L T+L + QD
Sbjct: 150 LMEINTS--GTFLTQALNHMYK-LRTNLQPLESTQSQD 184
>AK001275-1|BAA91595.1| 185|Homo sapiens protein ( Homo sapiens
cDNA FLJ10413 fis, clone NT2RP1000063. ).
Length = 185
Score = 31.5 bits (68), Expect = 2.3
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +2
Query: 188 FYNDVQKLV---ASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQSKQNKLDPLT 358
+Y ++ KL+ AS N+ K D +TL + M + + KLR + +VR Q KLD LT
Sbjct: 91 YYMELTKLLLNHASDNIPKADEIRTLVKDMWDTRI-AKLRVSADSFVRQQEAHAKLDNLT 149
Query: 359 SLSKASAQWEKRIHKSLNSMCSDLETSLAKIRPQSEQD 472
+ ++ + ++LN M L T+L + QD
Sbjct: 150 LMEINTS--GTFLTQALNHMYK-LRTNLQPLESTQSQD 184
>AF307339-1|AAK07559.1| 819|Homo sapiens B aggressive lymphoma
short isoform protein.
Length = 819
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +2
Query: 101 VMDGVKEEVIHQTALKLAEEIKNLSIYKSFYNDVQKLVASPNVKKEDFKQTLQQAMKEKG 280
V+ K+ V HQ +K +L IYK+F +++ K ++ Q+ ++ +E G
Sbjct: 415 VLTFAKDHVKHQLTVKFVIFPTDLEIYKAFSSEMAKRSKMLSLNNYSVPQSTREEKRENG 474
Query: 281 LDTK 292
L+ +
Sbjct: 475 LEAR 478
>AF307338-1|AAK07558.1| 854|Homo sapiens B aggressive lymphoma long
isoform protein.
Length = 854
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +2
Query: 101 VMDGVKEEVIHQTALKLAEEIKNLSIYKSFYNDVQKLVASPNVKKEDFKQTLQQAMKEKG 280
V+ K+ V HQ +K +L IYK+F +++ K ++ Q+ ++ +E G
Sbjct: 450 VLTFAKDHVKHQLTVKFVIFPTDLEIYKAFSSEMAKRSKMLSLNNYSVPQSTREEKRENG 509
Query: 281 LDTK 292
L+ +
Sbjct: 510 LEAR 513
>AF201939-1|AAF86875.1| 185|Homo sapiens DC5 protein.
Length = 185
Score = 31.5 bits (68), Expect = 2.3
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +2
Query: 188 FYNDVQKLV---ASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQSKQNKLDPLT 358
+Y ++ KL+ AS N+ K D +TL + M + + KLR + +VR Q KLD LT
Sbjct: 91 YYMELTKLLLNHASDNIPKADEIRTLVKDMWDTRI-AKLRVSADSFVRQQEAHAKLDNLT 149
Query: 359 SLSKASAQWEKRIHKSLNSMCSDLETSLAKIRPQSEQD 472
+ ++ + ++LN M L T+L + QD
Sbjct: 150 LMEINTS--GTFLTQALNHMYK-LRTNLQPLESTQSQD 184
>AF151880-1|AAD34117.1| 185|Homo sapiens CGI-122 protein protein.
Length = 185
Score = 31.5 bits (68), Expect = 2.3
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +2
Query: 188 FYNDVQKLV---ASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQSKQNKLDPLT 358
+Y ++ KL+ AS N+ K D +TL + M + + KLR + +VR Q KLD LT
Sbjct: 91 YYMELTKLLLNHASDNIPKADEIRTLVKDMWDTRI-AKLRVSADSFVRQQEAHAKLDNLT 149
Query: 359 SLSKASAQWEKRIHKSLNSMCSDLETSLAKIRPQSEQD 472
+ ++ + ++LN M L T+L + QD
Sbjct: 150 LMEINTS--GTFLTQALNHMYK-LRTNLQPLESTQSQD 184
>AB209742-1|BAD92979.1| 359|Homo sapiens B aggressive lymphoma gene
variant protein.
Length = 359
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +2
Query: 101 VMDGVKEEVIHQTALKLAEEIKNLSIYKSFYNDVQKLVASPNVKKEDFKQTLQQAMKEKG 280
V+ K+ V HQ +K +L IYK+F +++ K ++ Q+ ++ +E G
Sbjct: 64 VLTFAKDHVKHQLTVKFVIFPTDLEIYKAFSSEMAKRSKMLSLNNYSVPQSTREEKRENG 123
Query: 281 LDTK 292
L+ +
Sbjct: 124 LEAR 127
>BC052311-1|AAH52311.1| 571|Homo sapiens PR domain containing 14
protein.
Length = 571
Score = 30.3 bits (65), Expect = 5.4
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -1
Query: 471 SCSLCGRIFANDVSRSEHMEFND 403
SCS+CG+IF++ + HM+F++
Sbjct: 547 SCSICGKIFSDQETFYSHMKFHE 569
>AK022595-1|BAB14120.1| 571|Homo sapiens protein ( Homo sapiens
cDNA FLJ12533 fis, clone NT2RM4000202, weakly similar to
ZINC FINGER PROTEIN MOK-2. ).
Length = 571
Score = 30.3 bits (65), Expect = 5.4
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -1
Query: 471 SCSLCGRIFANDVSRSEHMEFND 403
SCS+CG+IF++ + HM+F++
Sbjct: 547 SCSICGKIFSDQETFYSHMKFHE 569
>AF319458-1|AAG39635.1| 571|Homo sapiens PR-domain containing
protein 14 protein.
Length = 571
Score = 30.3 bits (65), Expect = 5.4
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -1
Query: 471 SCSLCGRIFANDVSRSEHMEFND 403
SCS+CG+IF++ + HM+F++
Sbjct: 547 SCSICGKIFSDQETFYSHMKFHE 569
>AK223123-1|BAD96843.1| 185|Homo sapiens DNA replication complex
GINS protein PSF2 variant protein.
Length = 185
Score = 29.9 bits (64), Expect = 7.1
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 188 FYNDVQKLV---ASPNVKKEDFKQTLQQAMKEKGLDTKLRNTVFHWVRTQSKQNKLDPLT 358
+Y ++ KL+ AS N+ K D +TL + M + + KLR + +VR Q KLD LT
Sbjct: 91 YYMELTKLLLNHASDNIPKADEIRTLVKDMWDTRI-AKLRVSADSFVRQQEAHAKLDNLT 149
>BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 29.5 bits (63), Expect = 9.4
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Frame = +2
Query: 116 KEEVIHQTALKL-AEEIK-----NLSIYKSFYNDVQKLVASPNVKKEDFKQTLQQ--AMK 271
+E++ +T L+L A++++ N K + QKL+ K+++ +T + ++K
Sbjct: 296 QEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVK 355
Query: 272 EK---GLDTKLRNTVFHWVRTQSKQNKLDPLTSLSKASAQWEKRIHKSLNSMCSDLETSL 442
EK G+ +L +KQ + TS + +W K+ KSL+ +D + +
Sbjct: 356 EKEERGI-ARLAQATQERTDLYAKQGRGSQFTSKEERD-KWIKKELKSLDQAINDKKRQI 413
Query: 443 AKIRPQSEQDELADKWNELSTYN 511
A I E E A+K L YN
Sbjct: 414 AAIHKDLEDTE-ANKEKNLEQYN 435
>AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 29.5 bits (63), Expect = 9.4
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Frame = +2
Query: 116 KEEVIHQTALKL-AEEIK-----NLSIYKSFYNDVQKLVASPNVKKEDFKQTLQQ--AMK 271
+E++ +T L+L A++++ N K + QKL+ K+++ +T + ++K
Sbjct: 296 QEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVK 355
Query: 272 EK---GLDTKLRNTVFHWVRTQSKQNKLDPLTSLSKASAQWEKRIHKSLNSMCSDLETSL 442
EK G+ +L +KQ + TS + +W K+ KSL+ +D + +
Sbjct: 356 EKEERGI-ARLAQATQERTDLYAKQGRGSQFTSKEERD-KWIKKELKSLDQAINDKKRQI 413
Query: 443 AKIRPQSEQDELADKWNELSTYN 511
A I E E A+K L YN
Sbjct: 414 AAIHKDLEDTE-ANKEKNLEQYN 435
>AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated
polypeptide protein.
Length = 1217
Score = 29.5 bits (63), Expect = 9.4
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Frame = +2
Query: 116 KEEVIHQTALKL-AEEIK-----NLSIYKSFYNDVQKLVASPNVKKEDFKQTLQQ--AMK 271
+E++ +T L+L A++++ N K + QKL+ K+++ +T + ++K
Sbjct: 296 QEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVK 355
Query: 272 EK---GLDTKLRNTVFHWVRTQSKQNKLDPLTSLSKASAQWEKRIHKSLNSMCSDLETSL 442
EK G+ +L +KQ + TS + +W K+ KSL+ +D + +
Sbjct: 356 EKEERGI-ARLAQATQERTDLYAKQGRGSQFTSKEERD-KWIKKELKSLDQAINDKKRQI 413
Query: 443 AKIRPQSEQDELADKWNELSTYN 511
A I E E A+K L YN
Sbjct: 414 AAIHKDLEDTE-ANKEKNLEQYN 435
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,771,061
Number of Sequences: 237096
Number of extensions: 1409428
Number of successful extensions: 4699
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4698
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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