Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19c21
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    21   7.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.2  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   7.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.2  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   9.5  

>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 557 PFPRILSKNPFNTPIK 510
           PFP    + PFN  IK
Sbjct: 33  PFPTFPGQGPFNPKIK 48


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 600 DRCLVKVGRIISPLPFPSDFVKESLQHA 517
           +RCL++  R+  P+P  +  +K  L+ A
Sbjct: 401 ERCLLETLRMYPPVPLIAREIKTDLKLA 428


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 544 FCQRIPSTRPLNLHPLIPHSMTASL 470
           FC+  P+ RP++ H  I +++T  L
Sbjct: 52  FCEYDPNVRPISSHQ-IANNVTMQL 75


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 565 PPSLSLGFCQRIPSTRPLNLHPLIPH 488
           PPS+SL    R P T  +N   L  H
Sbjct: 130 PPSVSLSSPPREPGTPRINFTKLKRH 155


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 130 PPFTIFNGEHNFKELTNIFSIKHYKFI 50
           P  T+ N E+N    T I  I+H+  +
Sbjct: 79  PSQTLSNKEYNMLRTTAINVIRHFGIV 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,517
Number of Sequences: 438
Number of extensions: 2841
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)