Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19c19
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.7  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   6.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 107 FFAFFLKFTSSLVFCF*FDIYH 42
           FF  F+ FT  L+FC  F  ++
Sbjct: 169 FFCAFIIFTMHLLFCCAFIFFN 190


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 105 LCFFFKIHKLFGIL 64
           L FF+KI  +FGI+
Sbjct: 14  LSFFYKICNIFGIV 27


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = +2

Query: 494 FYS*KLPESIKNAKQSDIVLLVNMKTKLDAKIN*EVFIVALSNAMFMELSI 646
           FY  K    + N      +LLV +K  +D +    V + ++   M  +L I
Sbjct: 207 FYLSKRASDLCNEANKTKILLVGLKIDIDQEEERNVVVTSVLKLMQNKLEI 257


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 105 LCFFFKIHKLFGIL 64
           L FF+KI  +FGI+
Sbjct: 14  LSFFYKICNIFGIV 27


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 441 SPICIGEKKEQLLNLC 488
           SP+ +G+KK+  + +C
Sbjct: 343 SPMTVGKKKDGTVRIC 358


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,033
Number of Sequences: 336
Number of extensions: 3115
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)