Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19c19
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   0.90 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   2.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.4  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   8.4  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   8.4  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 20/75 (26%), Positives = 33/75 (44%)
 Frame = +1

Query: 145 SSHFINRQDNINNRCRRGLKDKTLDVFVSSDATVPVFKPHRQETFLNNSKKGEGSHATTF 324
           SS F++    +  R R GL+   ++    SD T+   + +  E    N    + ++    
Sbjct: 74  SSFFVDESGWLLVRNREGLQFYRME---GSDLTL---RHYCSEAIYRNGYGWDDANTVFL 127

Query: 325 FSRVYTKVGTISITT 369
             R+YT  GTI I T
Sbjct: 128 MGRIYTAAGTIGILT 142


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 499  IKIEQRLSNCSFFSPMQMGEFDSSP 425
            + + +R + CSF + +  G  DSSP
Sbjct: 956  LSVRRRNAQCSFIAGLLNGSIDSSP 980


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 19/75 (25%), Positives = 33/75 (44%)
 Frame = +1

Query: 145 SSHFINRQDNINNRCRRGLKDKTLDVFVSSDATVPVFKPHRQETFLNNSKKGEGSHATTF 324
           +S F++    +  R R GL+   ++    SD T+   + +  ET   N    + ++    
Sbjct: 74  NSFFVDESGWLLVRNREGLQFYRME---GSDLTL---RHYCSETKYRNRYGWDDANTVFL 127

Query: 325 FSRVYTKVGTISITT 369
             R+Y   GTI I T
Sbjct: 128 MGRIYNAAGTIGILT 142


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 448 FALVKKKNNCLTFVLFLFIKVTRVN*KCKTV*HSLIGQHENK 573
           FA  +     LTFVL L  K   V  + +     ++ +H+NK
Sbjct: 303 FAGFETSATTLTFVLHLLAKHPEVQLEGRECVRDVLAKHDNK 344


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/43 (27%), Positives = 16/43 (37%)
 Frame = -3

Query: 240 RIARHEDIKRLXXXXXXXXXXXIVLSVYKMRTTMCQNVIANFN 112
           +I +HED +R             V  VY     MCQ     +N
Sbjct: 498 KIDKHEDARRKKKQEVVELFKLEVPGVYDRMINMCQPTHKRYN 540


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,872
Number of Sequences: 2352
Number of extensions: 13290
Number of successful extensions: 55
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)