Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19c07
         (498 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X64228-1|CAA45535.1| 2090|Homo sapiens putative oncogene protein.      29   9.0  
D14689-1|BAA03515.1| 2093|Homo sapiens KIAA0023 protein.               29   9.0  
BC105998-1|AAI05999.1| 2080|Homo sapiens NUP214 protein protein.       29   9.0  
BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa prot...    29   9.0  
AL157938-9|CAI41111.1| 2090|Homo sapiens nucleoporin 214kDa prot...    29   9.0  
AL157938-8|CAI41109.1| 1684|Homo sapiens nucleoporin 214kDa prot...    29   9.0  
AB159230-1|BAD07398.1| 2091|Homo sapiens KIAA0023 splice variant...    29   9.0  

>X64228-1|CAA45535.1| 2090|Homo sapiens putative oncogene protein.
          Length = 2090

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 282  SARRGGI*TALQMSPKEI*QQKNSFSNATSGIGIATH*EDSTRNLFCHEAVVYFG 446
            + R GG  + L   P +    KN FS+A+ G G       +T NLF +     FG
Sbjct: 1879 TGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTA--TSNTSNLFGNSGAKTFG 1931


>D14689-1|BAA03515.1| 2093|Homo sapiens KIAA0023 protein.
          Length = 2093

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 282  SARRGGI*TALQMSPKEI*QQKNSFSNATSGIGIATH*EDSTRNLFCHEAVVYFG 446
            + R GG  + L   P +    KN FS+A+ G G       +T NLF +     FG
Sbjct: 1858 TGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTA--TSNTSNLFGNSGAKTFG 1910


>BC105998-1|AAI05999.1| 2080|Homo sapiens NUP214 protein protein.
          Length = 2080

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 282  SARRGGI*TALQMSPKEI*QQKNSFSNATSGIGIATH*EDSTRNLFCHEAVVYFG 446
            + R GG  + L   P +    KN FS+A+ G G       +T NLF +     FG
Sbjct: 1869 TGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTA--TSNTSNLFGNSGAKTFG 1921


>BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa protein.
          Length = 2090

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 282  SARRGGI*TALQMSPKEI*QQKNSFSNATSGIGIATH*EDSTRNLFCHEAVVYFG 446
            + R GG  + L   P +    KN FS+A+ G G       +T NLF +     FG
Sbjct: 1879 TGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTA--TSNTSNLFGNSGAKTFG 1931


>AL157938-9|CAI41111.1| 2090|Homo sapiens nucleoporin 214kDa protein.
          Length = 2090

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 282  SARRGGI*TALQMSPKEI*QQKNSFSNATSGIGIATH*EDSTRNLFCHEAVVYFG 446
            + R GG  + L   P +    KN FS+A+ G G       +T NLF +     FG
Sbjct: 1879 TGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTA--TSNTSNLFGNSGAKTFG 1931


>AL157938-8|CAI41109.1| 1684|Homo sapiens nucleoporin 214kDa protein.
          Length = 1684

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 282  SARRGGI*TALQMSPKEI*QQKNSFSNATSGIGIATH*EDSTRNLFCHEAVVYFG 446
            + R GG  + L   P +    KN FS+A+ G G       +T NLF +     FG
Sbjct: 1473 TGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTA--TSNTSNLFGNSGAKTFG 1525


>AB159230-1|BAD07398.1| 2091|Homo sapiens KIAA0023 splice variant 1
            protein.
          Length = 2091

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 282  SARRGGI*TALQMSPKEI*QQKNSFSNATSGIGIATH*EDSTRNLFCHEAVVYFG 446
            + R GG  + L   P +    KN FS+A+ G G       +T NLF +     FG
Sbjct: 1880 TGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTA--TSNTSNLFGNSGAKTFG 1932


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,515,832
Number of Sequences: 237096
Number of extensions: 1197864
Number of successful extensions: 1501
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)