Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19c06
         (556 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48717-10|CAA88612.2|  423|Caenorhabditis elegans Hypothetical p...    29   1.7  
Z48584-9|CAA88478.2|  423|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z83231-3|CAB05751.1|  247|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z68493-7|CAA92793.1|  339|Caenorhabditis elegans Hypothetical pr...    28   3.9  
U00055-3|AAA50723.3|  693|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical p...    27   6.9  
Z81585-4|CAB04687.1|  345|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z83220-1|CAB05700.2|  440|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z81568-9|CAB04599.2|  386|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z81459-1|CAB03827.3|  731|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z79604-6|CAB97241.2|  731|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>Z48717-10|CAA88612.2|  423|Caenorhabditis elegans Hypothetical
           protein ZK1321.4 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 214 QNYFG-HFGVCTGTQHQTVPPSNTTQAEGQTESWH 315
           QN FG HFG  +G   + +  +NT+ +  Q+ ++H
Sbjct: 135 QNNFGSHFGTGSGVNQRNITNTNTSSSNHQSSTFH 169


>Z48584-9|CAA88478.2|  423|Caenorhabditis elegans Hypothetical
           protein ZK1321.4 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 214 QNYFG-HFGVCTGTQHQTVPPSNTTQAEGQTESWH 315
           QN FG HFG  +G   + +  +NT+ +  Q+ ++H
Sbjct: 135 QNNFGSHFGTGSGVNQRNITNTNTSSSNHQSSTFH 169


>Z83231-3|CAB05751.1|  247|Caenorhabditis elegans Hypothetical
           protein F57G9.3 protein.
          Length = 247

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 123 KYNCISRSVCLDFVHFNVDCWCNFNVRAW 37
           KY  ++ SV ++F HF + CW N +   W
Sbjct: 150 KYTILAFSVIMEFYHFYMCCW-NISSNLW 177


>Z68493-7|CAA92793.1|  339|Caenorhabditis elegans Hypothetical
           protein C33A12.10 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 498 LMILVKCFASFLTSSSFRNDSTVSSDMFFVMSS 400
           L   V  +A +LT  SFRN+ +V+S+  F  SS
Sbjct: 299 LQFCVVTWAFYLTHPSFRNNQSVNSNKIFSTSS 331


>U00055-3|AAA50723.3|  693|Caenorhabditis elegans Hypothetical
           protein R02F2.7 protein.
          Length = 693

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = +2

Query: 338 TAD*FYFDCNY*FRVEMAENVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQ 517
           TA+     C Y   + +  +  D+  N SEL  +   K   +K++ KH   IIN     +
Sbjct: 282 TAEVCMSPCIYYAMISVLRSTFDL--NDSELIFIENLKTLKLKEITKHLPSIINSCSNTR 339

Query: 518 SPSIQRYLKNLQ 553
             +  + LKNL+
Sbjct: 340 QITASKKLKNLE 351


>Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.4 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 98  TDLEMQLYFYFFLS*KPYCFFLFTESLTNLIFGSLLNYF 214
           TD E++LYFY+  +      +  T S+ +L F  L++YF
Sbjct: 107 TDCEVELYFYYLTN------YFSTYSVFSLTFDRLISYF 139


>Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical
           protein F23B2.11 protein.
          Length = 1080

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +2

Query: 200 LLNYFKIILDILEFVRALNIR 262
           LLN  +++ D+ EF++A+NIR
Sbjct: 667 LLNSLQMLYDLAEFIKAVNIR 687


>Z81585-4|CAB04687.1|  345|Caenorhabditis elegans Hypothetical
           protein T05E12.4 protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 20  TNILSYHARTLKLHQQSTLKCTKSRQTDLEMQLYFYFFLS*KPYCFFLFTESLT 181
           T IL    RT+K  + + LK T S Q+D + ++  +  ++      F+ +E LT
Sbjct: 220 TTILILQLRTIKKRKANLLKSTSSNQSDNKFKMILWLTIT------FMLSEGLT 267


>Z83220-1|CAB05700.2|  440|Caenorhabditis elegans Hypothetical
           protein C34B7.1 protein.
          Length = 440

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -1

Query: 415 LCDVLNVLGHFNAKLIVAVKIKL-ICCEFCDFLGSAKIQSAPPLVLCLRVELSDVEC 248
           LC+V N +   N++  V +   + +C  +C+   +  I    PLV C   E SD +C
Sbjct: 185 LCEVRNTV---NSRYFVKICNDVNLCNNYCNPGQTPPIPQRQPLVRCYDCESSDSDC 238


>Z81568-9|CAB04599.2|  386|Caenorhabditis elegans Hypothetical
           protein K08E3.7 protein.
          Length = 386

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = +2

Query: 365 NY*FRVEMAENVEDITKNISELTVLSFRKLDDV---KKLAK 478
           N    + +  N+ED+TK++ +LT +   +L+ V   KKL+K
Sbjct: 19  NLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSK 59


>Z81459-1|CAB03827.3|  731|Caenorhabditis elegans Hypothetical
           protein C03H12.1 protein.
          Length = 731

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 374 FRVEMAENVEDITKNISELTVLSFRKLDDVKKL--AKHFTKIINH 502
           FR++ A+++  ++KN   LT+L F+     +K   A +F+K+  H
Sbjct: 242 FRLQSAQDLTTLSKNHDLLTILYFKIKTPPQKFQSASNFSKLAYH 286


>Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical
           protein D2005.4 protein.
          Length = 1188

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 359 DCNY*FRVEMAENVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSI 529
           DC+     E +E  ED TK  +ELTV+S     D + + K+   +I + + E   ++
Sbjct: 2   DCDSGMIAEQSEIQEDSTKQAAELTVVSSVSEVDQENV-KNTLHVIENKVEEPESAV 57


>Z79604-6|CAB97241.2|  731|Caenorhabditis elegans Hypothetical
           protein C03H12.1 protein.
          Length = 731

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 374 FRVEMAENVEDITKNISELTVLSFRKLDDVKKL--AKHFTKIINH 502
           FR++ A+++  ++KN   LT+L F+     +K   A +F+K+  H
Sbjct: 242 FRLQSAQDLTTLSKNHDLLTILYFKIKTPPQKFQSASNFSKLAYH 286


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,585,508
Number of Sequences: 27780
Number of extensions: 219516
Number of successful extensions: 758
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)