Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19c02
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   0.54 
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    25   2.2  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   3.8  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   3.8  
AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding pr...    23   8.8  
AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative odorant-b...    23   8.8  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   8.8  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.1 bits (57), Expect = 0.54
 Identities = 19/83 (22%), Positives = 40/83 (48%)
 Frame = +3

Query: 159 HEERAHRRLQIIYARKTKERQVFMQELKEIRQKNDKRMLKKVRDSIGPIWYQVLSVPQRS 338
           + E A +R Q +  R+ +ERQ   Q+ ++ +Q+  ++  ++ R        Q    PQ+ 
Sbjct: 168 NRETARKRQQRL-RRRERERQQQQQQQQQ-QQQQQQQQQQQQRQQQQQCQQQRQQQPQQQ 225

Query: 339 ALDTLEFSIYQDILEGRPIRTAR 407
            L   +  ++  ++ GRP +  R
Sbjct: 226 QLQQPQQQLWTTVVRGRPSQRHR 248


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
 Frame = +2

Query: 512 PYDLRPS-----YRWETSCLQSECPAHVVWYTIF 598
           PY+L PS     YR+E S     C   V+W T+F
Sbjct: 198 PYNLLPSNRTSFYRYEGSLTTPACAESVIW-TVF 230


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +1

Query: 34  AYFFLNCGFIKSISIYFFIPTIRYCQIQSREWYIKTMDLTQVMRNAPTGGSRSSTHGKLR 213
           AYFFL    + + SIY FI  + Y + QS    I    +   +RN P          +LR
Sbjct: 62  AYFFLTFLVVTACSIY-FISNV-YIKWQSSPIIIGLNPIATHIRNIPFPAVTICNMNQLR 119

Query: 214 KD 219
           ++
Sbjct: 120 RE 121


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +1

Query: 34  AYFFLNCGFIKSISIYFFIPTIRYCQIQSREWYIKTMDLTQVMRNAPTGGSRSSTHGKLR 213
           AYFFL    + + SIY FI  + Y + QS    I    +   +RN P          +LR
Sbjct: 62  AYFFLTFLVVTACSIY-FISNV-YIKWQSSPIIIGLNPIATHIRNIPFPAVTICNMNQLR 119

Query: 214 KD 219
           ++
Sbjct: 120 RE 121


>AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding
           protein AgamOBP47 protein.
          Length = 178

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 123 SRLYLAITNSRNKEINRNTLD 61
           ++LYLA T S   E N+ TLD
Sbjct: 83  TKLYLASTKSMAPEWNKITLD 103


>AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative
           odorant-binding protein OBPjj2 protein.
          Length = 228

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 123 SRLYLAITNSRNKEINRNTLD 61
           ++LYLA T S   E N+ TLD
Sbjct: 133 TKLYLASTKSMAPEWNKITLD 153


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 369 QDILEGRPIRTARVMKELGL 428
           Q I+EG  IR++R +K LG+
Sbjct: 700 QIIVEGHTIRSSRHLKYLGI 719


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,180
Number of Sequences: 2352
Number of extensions: 13329
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)