Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19c02
(675 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-1755|AAF52850.1| 734|Drosophila melanogaster CG13127-P... 44 2e-04
AE014297-4687|AAF57102.2| 814|Drosophila melanogaster CG15548-P... 42 0.001
AE013599-3571|AAF46980.1| 898|Drosophila melanogaster CG9861-PA... 41 0.002
DQ062804-1|AAY56677.1| 711|Drosophila melanogaster unknown prot... 38 0.009
AY058473-1|AAL13702.1| 711|Drosophila melanogaster GH27720p pro... 38 0.009
AE014297-1445|AAF54745.1| 711|Drosophila melanogaster CG14735-P... 38 0.009
AY069568-1|AAL39713.1| 513|Drosophila melanogaster LD29830p pro... 30 3.3
AF055719-1|AAC32822.3| 513|Drosophila melanogaster splicing fac... 30 3.3
AE014134-1720|AAF52825.1| 513|Drosophila melanogaster CG4602-PA... 30 3.3
AY122266-1|AAM52778.1| 369|Drosophila melanogaster SD18375p pro... 29 7.7
AE014297-2645|AAF55653.1| 368|Drosophila melanogaster CG3773-PA... 29 7.7
>AE014134-1755|AAF52850.1| 734|Drosophila melanogaster CG13127-PA
protein.
Length = 734
Score = 44.0 bits (99), Expect = 2e-04
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Frame = +3
Query: 306 WYQVLSVPQRSALDTLEFSIYQDILEGRPIRTARVMKELGLYPRPNIINLMNCVYLGRND 485
WY+ +SV Q A D L ++ D+ +G R + +LG+YP + + + + +
Sbjct: 17 WYRGMSVVQMKACDELLHALRDDMEQGSTYRVRHCITQLGIYPPVGAAQIKDIIAMSQGS 76
Query: 486 PKEMLAQLFLMTYGHP-------IDGKRAVYNLNARLMLSGILYLGLDNLIQLL 626
L L+ Y P + + +N +L+LSGI +L + + ++ L
Sbjct: 77 DLAFLWFLWEFAYKSPPKCGKDNCNSDSEHFTVNEQLLLSGIAHLDMPSTLRAL 130
>AE014297-4687|AAF57102.2| 814|Drosophila melanogaster CG15548-PA
protein.
Length = 814
Score = 41.5 bits (93), Expect = 0.001
Identities = 28/100 (28%), Positives = 50/100 (50%)
Frame = +3
Query: 306 WYQVLSVPQRSALDTLEFSIYQDILEGRPIRTARVMKELGLYPRPNIINLMNCVYLGRND 485
WY+ LS Q +A + L + +++ + A++M +LGL+P P L + L R +
Sbjct: 35 WYRGLSQSQMAAANALFDILRENMDKNTTSNVAKLMVKLGLHPYPPWKTLHMVIKLSRGN 94
Query: 486 PKEMLAQLFLMTYGHPIDGKRAVYNLNARLMLSGILYLGL 605
L L M Y P G+ Y++N +++++ I L L
Sbjct: 95 DLAFLWFLMEMCYKTPNHGE--TYSVNEQIIMTAIFRLDL 132
>AE013599-3571|AAF46980.1| 898|Drosophila melanogaster CG9861-PA
protein.
Length = 898
Score = 40.7 bits (91), Expect = 0.002
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +3
Query: 306 WYQVLSVPQRSALDTLEFSIYQDILEGRPIRTARVMKELGLYPRPNIINLMNCVYLGRND 485
WY +S Q + + T+ S+ D +G + + + LGL P + + V L RN+
Sbjct: 19 WYMGISAKQEATMSTMSESLRDDFEQGTGEKMFKALISLGLQPVISKKKISRIVQLSRNN 78
Query: 486 PKEMLAQLFLMTYG-HPIDGKRAVYNLNARLMLSGILYLGLDNLIQLL 626
+LA LF + G + VY++N +L+++ I + + I+ L
Sbjct: 79 ---ILAFLFFVMEGYYKTKQTDGVYSINEQLLMNAIAKIDMLPTIRAL 123
>DQ062804-1|AAY56677.1| 711|Drosophila melanogaster unknown
protein.
Length = 711
Score = 38.3 bits (85), Expect = 0.009
Identities = 31/105 (29%), Positives = 45/105 (42%)
Frame = +3
Query: 294 IGPIWYQVLSVPQRSALDTLEFSIYQDILEGRPIRTARVMKELGLYPRPNIINLMNCVYL 473
+G WY LS Q A++ L FSI D EG RT + LG+ P L + +
Sbjct: 8 VGASWYTNLSDFQVQAVEALAFSIRDDNAEGTVYRTQFCLSRLGVTPMVKTRMLRKLIGI 67
Query: 474 GRNDPKEMLAQLFLMTYGHPIDGKRAVYNLNARLMLSGILYLGLD 608
R L L Y G + Y + R+++S I +L L+
Sbjct: 68 CRGSDLAFLYFLMEACY----KGTGSAY--SERILMSAITFLDLE 106
>AY058473-1|AAL13702.1| 711|Drosophila melanogaster GH27720p
protein.
Length = 711
Score = 38.3 bits (85), Expect = 0.009
Identities = 31/105 (29%), Positives = 45/105 (42%)
Frame = +3
Query: 294 IGPIWYQVLSVPQRSALDTLEFSIYQDILEGRPIRTARVMKELGLYPRPNIINLMNCVYL 473
+G WY LS Q A++ L FSI D EG RT + LG+ P L + +
Sbjct: 8 VGASWYTNLSDFQVQAVEALAFSIRDDNAEGTVYRTQFCLSRLGVTPMVKTRMLRKLIGI 67
Query: 474 GRNDPKEMLAQLFLMTYGHPIDGKRAVYNLNARLMLSGILYLGLD 608
R L L Y G + Y + R+++S I +L L+
Sbjct: 68 CRGSDLAFLYFLMEACY----KGTGSAY--SERILMSAITFLDLE 106
>AE014297-1445|AAF54745.1| 711|Drosophila melanogaster CG14735-PA
protein.
Length = 711
Score = 38.3 bits (85), Expect = 0.009
Identities = 31/105 (29%), Positives = 45/105 (42%)
Frame = +3
Query: 294 IGPIWYQVLSVPQRSALDTLEFSIYQDILEGRPIRTARVMKELGLYPRPNIINLMNCVYL 473
+G WY LS Q A++ L FSI D EG RT + LG+ P L + +
Sbjct: 8 VGASWYTNLSDFQVQAVEALAFSIRDDNAEGTVYRTQFCLSRLGVTPMVKTRMLRKLIGI 67
Query: 474 GRNDPKEMLAQLFLMTYGHPIDGKRAVYNLNARLMLSGILYLGLD 608
R L L Y G + Y + R+++S I +L L+
Sbjct: 68 CRGSDLAFLYFLMEACY----KGTGSAY--SERILMSAITFLDLE 106
>AY069568-1|AAL39713.1| 513|Drosophila melanogaster LD29830p
protein.
Length = 513
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 43 FLNCGFIKSISIYFFIPTIR--YCQIQSREWYIKTMDLTQV 159
F N G I+ I +Y PTIR C +QSR Y+K D T V
Sbjct: 28 FGNIGKIEEIRLY---PTIRDVSCPVQSRICYVKYTDTTSV 65
>AF055719-1|AAC32822.3| 513|Drosophila melanogaster splicing factor
SRp54 protein.
Length = 513
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 43 FLNCGFIKSISIYFFIPTIR--YCQIQSREWYIKTMDLTQV 159
F N G I+ I +Y PTIR C +QSR Y+K D T V
Sbjct: 28 FGNIGKIEEIRLY---PTIRDVSCPVQSRICYVKYTDTTSV 65
>AE014134-1720|AAF52825.1| 513|Drosophila melanogaster CG4602-PA
protein.
Length = 513
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 43 FLNCGFIKSISIYFFIPTIR--YCQIQSREWYIKTMDLTQV 159
F N G I+ I +Y PTIR C +QSR Y+K D T V
Sbjct: 28 FGNIGKIEEIRLY---PTIRDVSCPVQSRICYVKYTDTTSV 65
>AY122266-1|AAM52778.1| 369|Drosophila melanogaster SD18375p
protein.
Length = 369
Score = 28.7 bits (61), Expect = 7.7
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Frame = +3
Query: 174 HRRLQIIYARKTKERQV-FMQELKEIRQKNDKRMLKKVRDSIGPIWYQVLSVPQRSALDT 350
H+ Q++ ++ Q+ +MQ +KE+R + ++ L +++DS L +P+ S + T
Sbjct: 266 HKEAQLVPLAESAALQIDYMQRVKEVRIQQAEQRLARLKDS-----RLRLGLPEESIVKT 320
Query: 351 LE-FSIYQD-----ILEGR 389
E F Y+D ++EGR
Sbjct: 321 KESFRNYRDPQDTFLIEGR 339
>AE014297-2645|AAF55653.1| 368|Drosophila melanogaster CG3773-PA
protein.
Length = 368
Score = 28.7 bits (61), Expect = 7.7
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Frame = +3
Query: 174 HRRLQIIYARKTKERQV-FMQELKEIRQKNDKRMLKKVRDSIGPIWYQVLSVPQRSALDT 350
H+ Q++ ++ Q+ +MQ +KE+R + ++ L +++DS L +P+ S + T
Sbjct: 265 HKEAQLVPLAESAALQIDYMQRVKEVRIQQAEQRLARLKDS-----RLRLGLPEESIVKT 319
Query: 351 LE-FSIYQD-----ILEGR 389
E F Y+D ++EGR
Sbjct: 320 KESFRNYRDPQDTFLIEGR 338
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,168,161
Number of Sequences: 53049
Number of extensions: 546340
Number of successful extensions: 1619
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1616
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -