Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19b21
         (580 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71261-3|CAA95802.1|  130|Caenorhabditis elegans Hypothetical pr...    52   4e-07
AL032640-3|CAA21641.2|  424|Caenorhabditis elegans Hypothetical ...    32   0.34 
U80031-2|AAB37612.1|  468|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AC024831-5|AAK72076.1|  186|Caenorhabditis elegans Hypothetical ...    28   4.2  
AF101314-2|AAM48557.1|  463|Caenorhabditis elegans Hypothetical ...    27   7.3  
AF101314-1|AAQ91895.1|  468|Caenorhabditis elegans Hypothetical ...    27   7.3  
AF047660-1|AAC04431.1|  900|Caenorhabditis elegans Osm-9 and cap...    27   9.6  
AC024799-4|AAK72318.1|  536|Caenorhabditis elegans Hypothetical ...    27   9.6  

>Z71261-3|CAA95802.1|  130|Caenorhabditis elegans Hypothetical
           protein F21C3.3 protein.
          Length = 130

 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +1

Query: 238 ELDRQAPIHFLVVPKKVIPVMSEASVDDEKIIGHLLLVANEVATKKGLYRQGYHVFLDEN 417
           ++  QAPIHFLV+PK+ I ++  A   D  +IG L++ A++VA + G+   GY V ++  
Sbjct: 47  DVSPQAPIHFLVIPKRRIDMLENAVDSDAALIGKLMVTASKVAKQLGM-ANGYRVVVNNG 105

Query: 418 HK-IMKLKALHVFGRALHHMVWPSG 489
                 +  LH+       + WP G
Sbjct: 106 KDGAQSVFHLHLHVLGGRQLQWPPG 130


>AL032640-3|CAA21641.2|  424|Caenorhabditis elegans Hypothetical
           protein Y43F8A.3 protein.
          Length = 424

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 22/87 (25%), Positives = 40/87 (45%)
 Frame = +1

Query: 166 IPSNITVQQVMGPEQI*KCVVFDEELDRQAPIHFLVVPKKVIPVMSEASVDDEKIIGHLL 345
           IP    + +    + + + V+FD         +   +PK +I       + DE +I    
Sbjct: 320 IPKRWEIVENSEAQNLLEKVIFDPNFSPIMRENLENLPKSLIVTCEYDVLRDEGLIYSER 379

Query: 346 LVANEVATKKGLYRQGYHVFLDENHKI 426
           L+A+ V TK   Y+ GYH  L+ +++I
Sbjct: 380 LMASGVPTKLINYKNGYHAMLNMHNEI 406


>U80031-2|AAB37612.1|  468|Caenorhabditis elegans Hypothetical
           protein B0554.5 protein.
          Length = 468

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = -3

Query: 332 IIFSSSTDASDMTGITFFGTTRKCIGACLSNSSSKTTHF*ICSGPITCWTV 180
           ++FS+ T  S +  ITFF    K +  C+ +SS K   F + +  +TC TV
Sbjct: 196 LLFSAFTGISVLGIITFFVMPSKDVENCIESSSEKKETF-MEAFKLTCSTV 245


>AC024831-5|AAK72076.1|  186|Caenorhabditis elegans Hypothetical
           protein Y55F3C.5 protein.
          Length = 186

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 66  NNCIIVLKCSSYLQYNYNEAVVFLNSPSSPKEPN 167
           N+C     C ++ +  YN A+VF+N+ S+    N
Sbjct: 21  NSCTKAPNCLAFTESQYNIAIVFMNNTSNECSAN 54


>AF101314-2|AAM48557.1|  463|Caenorhabditis elegans Hypothetical
           protein Y39D8A.1a protein.
          Length = 463

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -3

Query: 332 IIFSSSTDASDMTGITFFGTTRKCIGACLSNSSSKTTHF*ICSGPITCWTV 180
           ++FS+ T  S +  ITFF    K +  C+ +SS K   F + +  +TC T+
Sbjct: 191 LLFSAFTGISVLGIITFFVMPSKDVENCIESSSEKKETF-LEALKLTCSTL 240


>AF101314-1|AAQ91895.1|  468|Caenorhabditis elegans Hypothetical
           protein Y39D8A.1d protein.
          Length = 468

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -3

Query: 332 IIFSSSTDASDMTGITFFGTTRKCIGACLSNSSSKTTHF*ICSGPITCWTV 180
           ++FS+ T  S +  ITFF    K +  C+ +SS K   F + +  +TC T+
Sbjct: 196 LLFSAFTGISVLGIITFFVMPSKDVENCIESSSEKKETF-LEALKLTCSTL 245


>AF047660-1|AAC04431.1|  900|Caenorhabditis elegans Osm-9 and
           capsaicin receptor-relatedprotein 2 protein.
          Length = 900

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 120 EAVVFLNSPSSPKEPNP--LKYNRPTGYGPRTNLKVRS 227
           + ++ L    SPKE +   LKY+RPTG    TN K RS
Sbjct: 783 QVILMLELSLSPKERHQYLLKYSRPTG----TNKKTRS 816


>AC024799-4|AAK72318.1|  536|Caenorhabditis elegans Hypothetical
           protein Y49C4A.8a protein.
          Length = 536

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 81  VLKCSSYLQYNYNEAVVFLNSPSSPKEPNPLKYNRPTG-YGPRTNL 215
           VL   SY +     A + +N P SPKE N +KY    G +GP  N+
Sbjct: 437 VLFDDSYQKNAEKLANILMNQPYSPKE-NVIKYTEFLGEHGPFPNM 481


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,619,807
Number of Sequences: 27780
Number of extensions: 268097
Number of successful extensions: 629
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)