Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19b21
         (580 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   6.7  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   8.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   8.8  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 231 ENYALLNLFWAHNL 190
           E+Y +L++ W HN+
Sbjct: 74  EDYRILDVDWLHNI 87


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 406 KTRGILVGIILFLWL 362
           KT GI+VG  +  WL
Sbjct: 9   KTLGIIVGGFILCWL 23


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 406 KTRGILVGIILFLWL 362
           KT GI+VG  +  WL
Sbjct: 457 KTLGIIVGGFILCWL 471


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 165  WVL*VMRGYLKTQLLHYNYI 106
            W +  M+G  K++L HY+ +
Sbjct: 1020 WKIWPMKGEEKSRLFHYSVV 1039


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 114 YNEAVVFLNSPSSPKEPNP 170
           ++ ++V   SPSS + P+P
Sbjct: 28  FSSSIVDRRSPSSSRSPSP 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,388
Number of Sequences: 438
Number of extensions: 3550
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)