Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19b18
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 203 2e-53
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 105 4e-24
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 93 4e-20
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 91 2e-19
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 84 2e-17
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 83 3e-17
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 77 3e-15
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 75 1e-14
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 69 5e-13
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 66 3e-12
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 65 1e-11
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 61 1e-10
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 61 1e-10
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 61 2e-10
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 60 4e-10
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 56 5e-09
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 54 2e-08
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 34 0.021
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 30 0.26
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 1.0
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 28 1.4
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 28 1.4
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 28 1.4
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 27 3.2
SPAC23A1.15c |sec20||SNARE Sec20|Schizosaccharomyces pombe|chr 1... 27 3.2
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 26 4.2
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 26 4.2
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 26 4.2
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 26 4.2
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 4.2
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 26 5.6
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 26 5.6
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 7.4
SPCC1020.07 |||haloacid dehalogenase-like hydrolase|Schizosaccha... 25 7.4
SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces ... 25 9.7
SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak... 25 9.7
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 25 9.7
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 25 9.7
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 9.7
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 203 bits (496), Expect = 2e-53
Identities = 100/165 (60%), Positives = 125/165 (75%), Gaps = 1/165 (0%)
Frame = +3
Query: 171 SRKMTEYKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILD 350
S + EYKL KSALTIQLIQ+HFVDEYDPTIEDSYRK+ IDGE LLD+LD
Sbjct: 3 STYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLD 62
Query: 351 TAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNK 530
TAGQEEYSAMR+QYMRTGEGFLLV+ + S SF++I ++ +QI RVKD + P+VLV NK
Sbjct: 63 TAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANK 122
Query: 531 CDLQS-WAVDMARAREVAQSYNVPFVETSAKXRMGVDDAFYTLVR 662
CDL++ V A ++A+S + +VETSAK R+ V++AFY+LVR
Sbjct: 123 CDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVR 167
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 105 bits (253), Expect = 4e-24
Identities = 53/146 (36%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
Frame = +3
Query: 225 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 404
KS+LT+Q ++NHFV+ Y PTIE+++ K + G+ +I+DTAGQ+EYS + ++
Sbjct: 19 KSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGI 78
Query: 405 EGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL-QSWAVDMARAREVA 581
G++LV+++ S SFE + R++I E VP+V+VGNK DL AV + +A
Sbjct: 79 HGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRAVTAEEGKALA 138
Query: 582 QSYNVPFVETSAKXRMGVDDAFYTLV 659
+ + E SA+ V AF ++
Sbjct: 139 NEWKCAWTEASARHNENVARAFELII 164
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 92.7 bits (220), Expect = 4e-20
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Frame = +3
Query: 189 YKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 365
+KL KS L ++ + + + Y TI ++ + ++G+T L I DTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 366 EYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL-Q 542
+ + Y R G ++V+ V SF ++ + ++I R E V +LVGNK D+
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYA-VEGVNRLLVGNKSDMVD 127
Query: 543 SWAVDMARAREVAQSYNVPFVETSAKXRMGVDDAFYTLVR 662
V+ + A+E A S N+PF+ETSAK V+ AF T+ R
Sbjct: 128 KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSR 167
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 90.6 bits (215), Expect = 2e-19
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 4/169 (2%)
Frame = +3
Query: 168 ISRKMTEY--KLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLL 338
+S K +Y KL KS L ++ ++ F + TI ++ + + +DG+ L
Sbjct: 1 MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 339 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVL 518
I DTAGQE + + Y R G LL++ V KSF+++ ++ +++ +E V +L
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQ-HASENVYKIL 119
Query: 519 VGNKCDLQSW-AVDMARAREVAQSYNVPFVETSAKXRMGVDDAFYTLVR 662
+GNKCD + V + + +A V F+E SAK + VD+AF+TL R
Sbjct: 120 IGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAR 168
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 83.8 bits (198), Expect = 2e-17
Identities = 49/153 (32%), Positives = 85/153 (55%), Gaps = 7/153 (4%)
Frame = +3
Query: 225 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 401
K+++ Q + F +Y TI D K+V++D + L + DTAGQE + ++ + R
Sbjct: 21 KTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRG 80
Query: 402 GEGFLLVFAVNSAKSFEDIGSYREQI---KRVKDAEEVPMVLVGNKCDL--QSWAVDMAR 566
+ +LV+ VN++KSFE + S+R++ + E P +L+GNK D+ Q V ++
Sbjct: 81 ADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVEEQKRMVSKSK 140
Query: 567 AREVAQSY-NVPFVETSAKXRMGVDDAFYTLVR 662
A Q+ +P+ ETSAK + V +AF T+ +
Sbjct: 141 ALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 83.4 bits (197), Expect = 3e-17
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Frame = +3
Query: 225 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 401
KS L ++ +N F E TI + + +V+D + I DTAGQE Y A+ Y R
Sbjct: 23 KSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRG 82
Query: 402 GEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD-LQSWAVDMARAREV 578
G L+V+ + SF+++G + ++++ D+ + ++LVGNK D L AV A+
Sbjct: 83 AVGALIVYDITKQSSFDNVGRWLKELREHADS-NIVIMLVGNKTDLLHLRAVSTEEAQAF 141
Query: 579 AQSYNVPFVETSAKXRMGVDDAFYTLV 659
A N+ F+ETSA V++AF T++
Sbjct: 142 AAENNLSFIETSAMDASNVEEAFQTVL 168
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 76.6 bits (180), Expect = 3e-15
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
Frame = +3
Query: 225 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGQEEYSAMRDQYMR 398
KS+L ++ +++ F D + TI ++ Q + ID T + L+I DTAGQE Y ++ Y R
Sbjct: 27 KSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYR 86
Query: 399 TGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL--QSWAVDMARAR 572
++V+ + A S E S+ ++++R + E + + L GNK DL + AV+ A A
Sbjct: 87 NANCAIVVYDITQAASLEKAKSWIKELQR-QAPEGIVIALAGNKLDLAQERRAVEKADAE 145
Query: 573 EVAQSYNVPFVETSAKXRMGVDDAFYTLVR 662
A N+ F ETSAK V++ F + +
Sbjct: 146 AYAAEANLLFFETSAKTAENVNELFTAIAK 175
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 74.5 bits (175), Expect = 1e-14
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Frame = +3
Query: 225 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 401
K+ L Q + F EY TI D K VV+D + L + DTAGQE + ++ + R
Sbjct: 21 KTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRG 80
Query: 402 GEGFLLVFAVNSAKSFEDIGSYREQI--KRVKDAEEVPMVLVGNKC--DLQSWAVDMARA 569
+ ++V+ VN++KSF+ + ++R++ + +D P ++VGN+ D AV + RA
Sbjct: 81 ADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKDASKRAVSLHRA 140
Query: 570 REVAQS---YNVPFVETSAKXRMGVDDAFYTLVR 662
+ +S N+ E SAK V D F T+ R
Sbjct: 141 LDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 69.3 bits (162), Expect = 5e-13
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Frame = +3
Query: 225 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 404
K++L + +F Y+PTI ++Y + +DG + L + DTAGQEEY +R
Sbjct: 26 KTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDT 85
Query: 405 EGFLLVFAVNSAKSFED-IGSYREQIKRVKDAEEVPMVLVGNKCDLQ---------SWAV 554
++ FAV+S S E+ I + ++ + V +VLV KCDL+ S +
Sbjct: 86 HVIMICFAVDSRDSLENVITKWLPEVS--SNCPGVKLVLVALKCDLRGADEEQVDHSKII 143
Query: 555 DMARAREVAQSYN-VPFVETSAKXRMGVDDAFYTLVR 662
D A+ N V ++E SAK GV++AF R
Sbjct: 144 DYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 66.5 bits (155), Expect = 3e-12
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Frame = +3
Query: 225 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 404
K++L +F EY PT+ ++Y +DG++ L + DTAGQEEY +R
Sbjct: 21 KTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKA 80
Query: 405 EGFLLVFAVNSAKSFEDIGS-YREQIKRVKDAEEVPMVLVGNKCDLQSWAVDMARAREVA 581
L+ FA++S S E++ + + E+I + VP +LVG K DL+S V + R
Sbjct: 81 HIILVGFAIDSPDSLENVSTKWIEEINTL--CPNVPFILVGMKADLRSDPVAIEEMRRRN 138
Query: 582 QSY 590
Q++
Sbjct: 139 QNF 141
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 64.9 bits (151), Expect = 1e-11
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = +3
Query: 171 SRKMTEYKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDIL 347
S + ++KL K++L + + + F + Y TI D K + ++ T L +
Sbjct: 6 SFSLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 65
Query: 348 DTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGN 527
DTAGQE + ++ Y+R ++V+ + + SF + + E + R + ++V +VLVGN
Sbjct: 66 DTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDV-RAERGDDVIIVLVGN 124
Query: 528 KCDL-QSWAVDMARAREVAQSYNVPFVETSAK 620
K DL V + A+ + +ETSAK
Sbjct: 125 KTDLADKRQVTQEEGEKKAKELKIMHMETSAK 156
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 61.3 bits (142), Expect = 1e-10
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +3
Query: 225 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 404
K+ L I N F +Y PT+ D+Y V+I E L + DTAGQE+Y +R
Sbjct: 16 KTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQT 75
Query: 405 EGFLLVFAVNSAKSFEDI-GSYREQIKRVKDAEEVPMVLVGNKCDLQ 542
+ FL+ F+V S SFE++ + ++ VP ++VG + DL+
Sbjct: 76 DVFLVCFSVTSPASFENVKEKWFPEVHH--HCPGVPCLIVGTQIDLR 120
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 61.3 bits (142), Expect = 1e-10
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 16/179 (8%)
Frame = +3
Query: 171 SRKMTEYKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDIL- 347
S+ T KL K+ L I F + Y PT+ ++Y + + ++++
Sbjct: 9 SKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELAL 68
Query: 348 -DTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDI-GSYREQIKRVKDAEEVPMVLV 521
DTAGQEEY +R LL F+++ S ++ + +++ P+VLV
Sbjct: 69 WDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHF--CPRTPIVLV 126
Query: 522 GNKCDLQS-------------WAVDMARAREVAQSYNVPFVETSAKXRMGVDDAFYTLV 659
G K DL+ V +A+ VA S N P+VE SAK GV++ F V
Sbjct: 127 GLKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVFQLAV 185
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 60.9 bits (141), Expect = 2e-10
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Frame = +3
Query: 225 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDG-----ETCLLDILDTAGQEEYSAMRDQ 389
KS L + ++N + D+ T+ + +++ G + L I DTAGQE++ ++
Sbjct: 22 KSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARN 81
Query: 390 YMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLQSW-AVDMAR 566
Y R G +LV+ V + SFE++ S+ I R + +VL G+K DLQ+ V
Sbjct: 82 YYRGAAGAVLVYDVTNKDSFEELSSWLSDI-RAMAPSTICVVLAGSKSDLQNQRQVSTEE 140
Query: 567 AREVAQSYNVPFV-ETSAKXRMGVDDAFYTLV 659
A E ++ ETS+ V++ F ++V
Sbjct: 141 AAEFCSEKHISSAHETSSYTGSNVEECFLSVV 172
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 59.7 bits (138), Expect = 4e-10
Identities = 36/114 (31%), Positives = 61/114 (53%)
Frame = +3
Query: 321 GETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAE 500
GE C ++ DTAGQE+ +RD Y G+ +++F V S +++++ + + RV E
Sbjct: 56 GEICF-NVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRV--CE 112
Query: 501 EVPMVLVGNKCDLQSWAVDMARAREVAQSYNVPFVETSAKXRMGVDDAFYTLVR 662
+P+VL GNK D++ V A+A + N+ + + SAK + F L R
Sbjct: 113 NIPIVLCGNKVDVKERKV-KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLAR 165
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 56.0 bits (129), Expect = 5e-09
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Frame = +3
Query: 225 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 404
K+ L I + F + Y PT+ ++Y V +DG L + DTAGQE+Y +R
Sbjct: 19 KTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDS 78
Query: 405 EGFLLVFAVNSAKSFEDIGSYREQIKRVKD-AEEVPMVLVGNKCDLQS------------ 545
L+ F+V++ +S +++ + I V +P++LVG K DL++
Sbjct: 79 HVVLICFSVDAPESLDNV--QEKWISEVLHFCSNLPILLVGCKVDLRNDPKTIEELSKTS 136
Query: 546 -WAVDMARAREVAQSYNV-PFVETSAKXRMGVDDAFYTLVR 662
+ + VAQ ++E SAK GV++ F T R
Sbjct: 137 QKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR 177
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 54.0 bits (124), Expect = 2e-08
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +3
Query: 225 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 404
K+ L I + F + Y PT+ ++Y V +DG L + DTAGQE+Y +R
Sbjct: 19 KTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDS 78
Query: 405 EGFLLVFAVNSAKSFEDIGSYREQIKRVKD-AEEVPMVLVGNKCDLQS 545
L+ FAV+S S +++ + I V +P++LV K DL++
Sbjct: 79 HVILICFAVDSPDSLDNV--QEKWISEVLHFCSSLPILLVACKADLRN 124
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 33.9 bits (74), Expect = 0.021
Identities = 32/123 (26%), Positives = 51/123 (41%)
Frame = -2
Query: 643 ASSTPMRXLADVSTNGTL*LCATSRARAMSTAHDCRSHLLPTSTMGTSSASFTRLICSRY 464
+SST LA STN T TS A + S + S+ +S++ +SS + T +
Sbjct: 151 SSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATS 210
Query: 463 EPMSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSSKHVSPSITTCLRYESSI 284
+SS + ++S S + S A SS + S+ S + TT S+
Sbjct: 211 SSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASAT 270
Query: 283 VGS 275
S
Sbjct: 271 SSS 273
Score = 33.5 bits (73), Expect = 0.028
Identities = 43/131 (32%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Frame = -2
Query: 643 ASSTPMRXLADVSTNGTL*LCATSRARAMSTAHDCRSHLLPTSTMGT---SSASFTRLIC 473
+SSTP+ S+N T ATS + S+A S LLP+ST + SSA+ T
Sbjct: 250 SSSTPL-----TSSNSTT--AATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATS 302
Query: 472 SRYEPMSSKLLALLTANTSKNPSPVRMYWSLIA-EYSSWPAVSRMSSKHVSPSITTCLRY 296
+ P++S T+ +S S V S A SS P S S+ S S T
Sbjct: 303 ASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSV 362
Query: 295 ESSIVGSYSST 263
S+ S SST
Sbjct: 363 NSTTATSASST 373
Score = 29.5 bits (63), Expect = 0.45
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -2
Query: 517 STMGTSSASFTRLICSRYEPMSSKLLALLTANTSKNPSPVRM-YWSLIAEYSSWPAVSRM 341
+T SS+S T + SS LA + N++ + SP S A SS + S
Sbjct: 66 NTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTT 125
Query: 340 SSKHVSPSITTCLRYESSIVGS 275
SS S SIT+ SSI S
Sbjct: 126 SSSLASSSITSSSLASSSITSS 147
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 30.3 bits (65), Expect = 0.26
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 435 SAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKC-DLQSW--AVDMARAREVAQSYNVPFV 605
+A + E++ +QI+ +KD V L KC +LQ+ ++ A RE QS +
Sbjct: 82 AAATPEELAEMEKQIQELKDEVSVVKTLYKEKCIELQALNNSLSPAEIREKIQSIDKEIE 141
Query: 606 ETSAK 620
ETS+K
Sbjct: 142 ETSSK 146
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 1.0
Identities = 28/119 (23%), Positives = 51/119 (42%)
Frame = -2
Query: 640 SSTPMRXLADVSTNGTL*LCATSRARAMSTAHDCRSHLLPTSTMGTSSASFTRLICSRYE 461
SST + +S++ TS + ++S + S P++T+ TS++S + S
Sbjct: 501 SSTSFTKFSSLSSSQLSTENFTSASSSLSLTNAKSSLSTPSTTIPTSNSSVSLQTSSSLI 560
Query: 460 PMSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSSKHVSPSITTCLRYESSI 284
S + + LTA ++ P+ Y+S + S+ + S IT C S I
Sbjct: 561 ISSPIISSSLTATSTSTPALTHSITPSNTSYTS-SLIPSSSTDYSSSLITVCSNVTSEI 618
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 27.9 bits (59), Expect = 1.4
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Frame = -2
Query: 580 ATSRARAMSTAHDCRSHLLPTSTMGTSSASF------TRLICSRYEPM-SSKLLALLTAN 422
+T + +A SHL PTS +SS + T S P+ SS+ + T+N
Sbjct: 222 STEKPLLSVSALSSSSHLQPTSATSSSSRLYPSRPAPTPPASSSSSPLLSSQTVKTTTSN 281
Query: 421 TSKNPSPV---RMYWSLIAEYS----SWPAVSRMSSKHVSPSITT 308
S+ PSP+ + ++I +S + +S +KH+ P+ +T
Sbjct: 282 ASRQPSPLVSSKSTDNIIRSHSPVLLTPQTLSTSETKHIRPNNST 326
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 27.9 bits (59), Expect = 1.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 441 KSFEDIGSYREQIKRVKDAEEVPM 512
+S+ DIG QI+ +K+A E+P+
Sbjct: 188 ESYADIGGLESQIQEIKEAVELPL 211
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 27.9 bits (59), Expect = 1.4
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 387 QYMRTGEGFLLVFAVNSAKSFED--IGSYREQIKRVKDAEEVPMVLVGNKCDLQSWAVDM 560
++MR + ++FED G E K + VP VL+GN +S+
Sbjct: 587 KFMRDASNRQKALVQDEMQAFEDELAGVPNEDDTSQKGEDGVPGVLIGNNTGRRSFKPSE 646
Query: 561 ARAREVAQSYNVPFVETSA 617
A+ S PFV SA
Sbjct: 647 EAAKLSLPSRKNPFVSDSA 665
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 26.6 bits (56), Expect = 3.2
Identities = 8/24 (33%), Positives = 19/24 (79%)
Frame = +3
Query: 444 SFEDIGSYREQIKRVKDAEEVPMV 515
++ D+G +EQI+R+++ E+P++
Sbjct: 177 TYGDVGGCKEQIERLREVVELPLL 200
>SPAC23A1.15c |sec20||SNARE Sec20|Schizosaccharomyces pombe|chr
1|||Manual
Length = 226
Score = 26.6 bits (56), Expect = 3.2
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +3
Query: 441 KSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLQSWAVDMARAREVAQSYNVPFVETSAK 620
+S ++ GS++ + A +V + + AVDM+ + S + +ET +
Sbjct: 106 RSMDNSGSWQSDDIYLTSASQVTAAMRDIHAQMVQ-AVDMSAENAMELSSSTNLLETLQE 164
Query: 621 XRMGVDDAFYTLVR 662
GV+D YT R
Sbjct: 165 KYFGVEDVLYTSKR 178
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 26.2 bits (55), Expect = 4.2
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 457 MSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSSKHVSPSITT-CLRYESSI 284
+S L + LTA +S+N V + L E + + SK +SP++ C RY+SS+
Sbjct: 428 ISQSLQSSLTAESSRNKELVAGFLMLSEEIGIQKWIIQSLSK-MSPTLNDFCRRYDSSM 485
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 375 PNTLPGQPCPGCRVNTSHRRSRLVYGTN 292
P+T P QPC ++ T + R+VY N
Sbjct: 13 PSTKPSQPC---KIGTDFKGERIVYPAN 37
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 26.2 bits (55), Expect = 4.2
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 464 VSRADQASEGRGRGAHGTCGQQV 532
+ +A + G+G HG+CG+ V
Sbjct: 91 IHKASNGTNGKGGNRHGSCGKSV 113
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 26.2 bits (55), Expect = 4.2
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +3
Query: 309 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRV 488
V D + + LDT G + AMR + + +LV A + + + E IK +
Sbjct: 213 VPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDGVKPQTV----EAIKHI 268
Query: 489 KDAEEVPMVLVGNKCD 536
+ A +VP+V+ K D
Sbjct: 269 QSA-DVPVVVALTKSD 283
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 26.2 bits (55), Expect = 4.2
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Frame = -2
Query: 574 SRARAMSTAHDCRSHLLPTSTMG-----TSSASFTRLI--CSRYEPMSSK--LLALLTAN 422
S + +T+H + +P +TMG SS S + + + Y+ +SK ++L N
Sbjct: 109 SNTPSFTTSHSSSTTFVPPATMGGGLNNLSSPSSSLYLPGSASYQRSNSKNSSASILQMN 168
Query: 421 TSKNPSPVRMYWSLIAEYSSWPAVSRMS 338
T+ + P+ + ++ Y+ P+ SR S
Sbjct: 169 TTLDDIPILLRRPGLSSYTPGPSTSRRS 196
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 25.8 bits (54), Expect = 5.6
Identities = 24/104 (23%), Positives = 46/104 (44%)
Frame = +3
Query: 225 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 404
+ +TIQ H E ++ KQ ++ ++I+DT G +++ ++ +R
Sbjct: 110 EKGITIQSAATHCTWERTVDQIEANEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVL 169
Query: 405 EGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD 536
+G +LV S + I + Q++R VP + NK D
Sbjct: 170 DGAVLVLCAVSGVQSQTI-TVDRQMRRY----NVPRISFVNKMD 208
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 466 YEPMSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSS 335
Y+ +S+ + A + S N PVR S++AE+ AV + S
Sbjct: 672 YDSVSASISARIKRQNSLNLKPVRFRISVLAEFFGSQAVFVLES 715
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 327 TCLLDILDTAGQEEYSAMRDQYMRTGE-GFLLVFAVNSAKSFEDIGSYREQIKRVKDAEE 503
+C+LD++ T ++ Y R + M+ + G + +++AK E+ + R++ EE
Sbjct: 274 SCMLDLIQTTEEKLYEQYRQEQMKVRQYGEPKLRTIDNAKFKEEEENLRKRFTEQVRVEE 333
>SPCC1020.07 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 25.4 bits (53), Expect = 7.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -2
Query: 529 LLPTSTMGTSSASFTRLICSRYE--PMSSKLLALLTANTSKNPSPVRMYWS 383
L+ T ++ T S T +I RY P S ++ A + TSK S + + WS
Sbjct: 14 LVDTESIYTKS---TNIILKRYNKGPFSMEVKAKMMGRTSKEASRIFLDWS 61
>SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 441
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 270 RPRSDSVSAV*SMRIYQRLPHPQPPICTRSSCE 172
R RSDS+ A+ + PPI T S CE
Sbjct: 137 RLRSDSLKALRQFFSSKDFTETNPPIITSSDCE 169
>SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 708
Score = 25.0 bits (52), Expect = 9.7
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = -2
Query: 535 SHLLPTS-TMGTSSASFTRLICSRYEPMSSKLLALLTANTSKN--PSPVRMYWSLIAEYS 365
SH L +S + FTRL + + S L AL+TAN + N P I E+S
Sbjct: 333 SHTLASSLAVYQFCLDFTRLNRTPEPYVRSSLQALITANNAVNLRDQPTSYMLECIREFS 392
Query: 364 SWPA 353
P+
Sbjct: 393 GLPS 396
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 402 GEGFLLVFAVNSAKSFEDIGSYREQIKRVKDA 497
G G LL F K + + Y+E+ K KDA
Sbjct: 557 GVGMLLSFFTKQEKLSQSVTEYKEKDKGFKDA 588
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 402 GEGFLLVFAVNSAKSFEDIGSYREQIKRVKDA 497
G G LL F K + + Y+E+ K KDA
Sbjct: 557 GVGMLLSFFTKQEKLSQSVTEYKEKDKGFKDA 588
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 482 ASEGRGRGAHGTCGQQVRPT 541
A E GR H TC Q+VRP+
Sbjct: 542 AVEEEGRIFHATCLQEVRPS 561
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,846,394
Number of Sequences: 5004
Number of extensions: 62169
Number of successful extensions: 237
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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