Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19b17
         (662 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U47924-16|AAB51329.1|  126|Homo sapiens C10 protein.                   93   8e-19
BC009925-1|AAH09925.1|  126|Homo sapiens chromosome 12 open read...    93   8e-19

>U47924-16|AAB51329.1|  126|Homo sapiens C10 protein.
          Length = 126

 Score = 93.1 bits (221), Expect = 8e-19
 Identities = 39/107 (36%), Positives = 74/107 (69%)
 Frame = +2

Query: 119 SSPQSVSVDQMRQILNEIIDALESPDYASKLDEAKEAAGNEMLKMMQIVFPMVVQIEMET 298
           + P ++S +Q + +L E+I A  +P+ A ++DEA++ A N+M KM+Q V P+  QI+ E 
Sbjct: 6   TQPAALSAEQAKVVLAEVIQAFSAPENAVRMDEARDNACNDMGKMLQFVLPVATQIQQEV 65

Query: 299 IKHHGFNNSREGIVQFTQLIRDLESIDGEVARLHTQIRSHYLPPVSI 439
           IK +GF+   EG+++F +L++  E+ D E+A L  ++++ +LPP+++
Sbjct: 66  IKAYGFSCDGEGVLKFARLVKSYEAQDPEIASLSGKLKALFLPPMTL 112


>BC009925-1|AAH09925.1|  126|Homo sapiens chromosome 12 open reading
           frame 57 protein.
          Length = 126

 Score = 93.1 bits (221), Expect = 8e-19
 Identities = 39/107 (36%), Positives = 74/107 (69%)
 Frame = +2

Query: 119 SSPQSVSVDQMRQILNEIIDALESPDYASKLDEAKEAAGNEMLKMMQIVFPMVVQIEMET 298
           + P ++S +Q + +L E+I A  +P+ A ++DEA++ A N+M KM+Q V P+  QI+ E 
Sbjct: 6   TQPAALSAEQAKVVLAEVIQAFSAPENAVRMDEARDNACNDMGKMLQFVLPVATQIQQEV 65

Query: 299 IKHHGFNNSREGIVQFTQLIRDLESIDGEVARLHTQIRSHYLPPVSI 439
           IK +GF+   EG+++F +L++  E+ D E+A L  ++++ +LPP+++
Sbjct: 66  IKAYGFSCDGEGVLKFARLVKSYEAQDPEIASLSGKLKALFLPPMTL 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,406,997
Number of Sequences: 237096
Number of extensions: 1902907
Number of successful extensions: 3653
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3653
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)