Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19b10
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75090-1|CAA52981.1| 249|Homo sapiens PHAPI (Putative HLA DR As... 36 0.16
U73477-1|AAB39706.1| 249|Homo sapiens acidic nuclear phosphopro... 36 0.16
U60823-1|AAC50570.1| 249|Homo sapiens potent heat-stable protei... 36 0.16
BT007436-1|AAP36104.1| 249|Homo sapiens acidic (leucine-rich) n... 36 0.16
BC125143-1|AAI25144.1| 238|Homo sapiens ANP32A protein protein. 36 0.16
BC007200-1|AAH07200.1| 249|Homo sapiens acidic (leucine-rich) n... 36 0.16
BC000608-1|AAH00608.1| 209|Homo sapiens ANP32A protein protein. 36 0.16
AY349171-1|AAQ79832.1| 249|Homo sapiens inhibitor-1 of protein ... 36 0.16
AK223280-1|BAD97000.1| 249|Homo sapiens acidic (leucine-rich) n... 36 0.16
AF025684-1|AAB91548.1| 249|Homo sapiens cerebellar leucine rich... 36 0.16
DQ083510-1|AAZ31261.1| 245|Homo sapiens hepatopoietin PCn127 pr... 34 0.38
U14680-1|AAA73985.1| 1863|Homo sapiens breast and ovarian cancer... 32 1.5
L78833-1|AAC37594.1| 1863|Homo sapiens BRCA1 protein. 32 1.5
DQ478408-3|ABF14462.1| 1822|Homo sapiens early onset breast canc... 32 1.5
DQ190457-3|ABA29229.1| 1822|Homo sapiens breast cancer 1 early o... 32 1.5
DQ190456-3|ABA29226.1| 1863|Homo sapiens breast cancer 1 early o... 32 1.5
DQ190455-3|ABA29223.1| 1863|Homo sapiens breast cancer 1 early o... 32 1.5
DQ190454-3|ABA29220.1| 1863|Homo sapiens breast cancer 1 early o... 32 1.5
DQ190453-3|ABA29217.1| 1863|Homo sapiens breast cancer 1 early o... 32 1.5
DQ190452-3|ABA29214.1| 1863|Homo sapiens breast cancer 1 early o... 32 1.5
DQ190451-3|ABA29211.1| 1863|Homo sapiens breast cancer 1 early o... 32 1.5
DQ190450-3|ABA29208.1| 1863|Homo sapiens breast cancer 1 early o... 32 1.5
BC085615-1|AAH85615.1| 624|Homo sapiens BRCA1 protein protein. 32 1.5
BC072418-1|AAH72418.1| 699|Homo sapiens BRCA1 protein protein. 32 1.5
AY273801-1|AAP12647.1| 1863|Homo sapiens breast cancer 1, early ... 32 1.5
AF005068-1|AAB61673.1| 1792|Homo sapiens breast and ovarian canc... 32 1.5
U64805-1|AAC00049.1| 759|Homo sapiens Brca1-delta11b protein. 31 2.7
BC115037-1|AAI15038.1| 1354|Homo sapiens BRCA1 protein protein. 31 2.7
AY751490-1|AAU93634.1| 1841|Homo sapiens breast and ovarian canc... 31 2.7
AK074402-1|BAB85071.1| 1336|Homo sapiens protein ( Homo sapiens ... 31 2.7
AC104650-2|AAY40932.1| 1336|Homo sapiens unknown protein. 31 2.7
>X75090-1|CAA52981.1| 249|Homo sapiens PHAPI (Putative HLA DR
Associated Protein I) protein.
Length = 249
Score = 35.5 bits (78), Expect = 0.16
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 156 RQETSPKSNAVDQSSSSP---EIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFP 326
R + K +D S S+ E T+ + LE S + S +N+P K+E
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSD 73
Query: 327 NWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKD-HDVEGLQDWKPEVIGKNAVRT 503
N + V K T ++ N ++DL +P K +++ L + EV N R
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE 133
Query: 504 NITKKLRARSPLD 542
N+ K L + LD
Sbjct: 134 NVFKLLPQLTYLD 146
>U73477-1|AAB39706.1| 249|Homo sapiens acidic nuclear
phosphoprotein pp32 protein.
Length = 249
Score = 35.5 bits (78), Expect = 0.16
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 156 RQETSPKSNAVDQSSSSP---EIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFP 326
R + K +D S S+ E T+ + LE S + S +N+P K+E
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSD 73
Query: 327 NWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKD-HDVEGLQDWKPEVIGKNAVRT 503
N + V K T ++ N ++DL +P K +++ L + EV N R
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE 133
Query: 504 NITKKLRARSPLD 542
N+ K L + LD
Sbjct: 134 NVFKLLPQLTYLD 146
>U60823-1|AAC50570.1| 249|Homo sapiens potent heat-stable protein
phosphatase 2A inhibitor I1PP2A protein.
Length = 249
Score = 35.5 bits (78), Expect = 0.16
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 156 RQETSPKSNAVDQSSSSP---EIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFP 326
R + K +D S S+ E T+ + LE S + S +N+P K+E
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSD 73
Query: 327 NWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKD-HDVEGLQDWKPEVIGKNAVRT 503
N + V K T ++ N ++DL +P K +++ L + EV N R
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE 133
Query: 504 NITKKLRARSPLD 542
N+ K L + LD
Sbjct: 134 NVFKLLPQLTYLD 146
>BT007436-1|AAP36104.1| 249|Homo sapiens acidic (leucine-rich)
nuclear phosphoprotein 32 family, member A protein.
Length = 249
Score = 35.5 bits (78), Expect = 0.16
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 156 RQETSPKSNAVDQSSSSP---EIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFP 326
R + K +D S S+ E T+ + LE S + S +N+P K+E
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSD 73
Query: 327 NWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKD-HDVEGLQDWKPEVIGKNAVRT 503
N + V K T ++ N ++DL +P K +++ L + EV N R
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE 133
Query: 504 NITKKLRARSPLD 542
N+ K L + LD
Sbjct: 134 NVFKLLPQLTYLD 146
>BC125143-1|AAI25144.1| 238|Homo sapiens ANP32A protein protein.
Length = 238
Score = 35.5 bits (78), Expect = 0.16
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 156 RQETSPKSNAVDQSSSSP---EIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFP 326
R + K +D S S+ E T+ + LE S + S +N+P K+E
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSD 73
Query: 327 NWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKD-HDVEGLQDWKPEVIGKNAVRT 503
N + V K T ++ N ++DL +P K +++ L + EV N R
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE 133
Query: 504 NITKKLRARSPLD 542
N+ K L + LD
Sbjct: 134 NVFKLLPQLTYLD 146
>BC007200-1|AAH07200.1| 249|Homo sapiens acidic (leucine-rich)
nuclear phosphoprotein 32 family, member A protein.
Length = 249
Score = 35.5 bits (78), Expect = 0.16
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 156 RQETSPKSNAVDQSSSSP---EIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFP 326
R + K +D S S+ E T+ + LE S + S +N+P K+E
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSD 73
Query: 327 NWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKD-HDVEGLQDWKPEVIGKNAVRT 503
N + V K T ++ N ++DL +P K +++ L + EV N R
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE 133
Query: 504 NITKKLRARSPLD 542
N+ K L + LD
Sbjct: 134 NVFKLLPQLTYLD 146
>BC000608-1|AAH00608.1| 209|Homo sapiens ANP32A protein protein.
Length = 209
Score = 35.5 bits (78), Expect = 0.16
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 156 RQETSPKSNAVDQSSSSP---EIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFP 326
R + K +D S S+ E T+ + LE S + S +N+P K+E
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSD 73
Query: 327 NWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKD-HDVEGLQDWKPEVIGKNAVRT 503
N + V K T ++ N ++DL +P K +++ L + EV N R
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE 133
Query: 504 NITKKLRARSPLD 542
N+ K L + LD
Sbjct: 134 NVFKLLPQLTYLD 146
>AY349171-1|AAQ79832.1| 249|Homo sapiens inhibitor-1 of protein
phosphatase-2A protein.
Length = 249
Score = 35.5 bits (78), Expect = 0.16
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 156 RQETSPKSNAVDQSSSSP---EIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFP 326
R + K +D S S+ E T+ + LE S + S +N+P K+E
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSD 73
Query: 327 NWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKD-HDVEGLQDWKPEVIGKNAVRT 503
N + V K T ++ N ++DL +P K +++ L + EV N R
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE 133
Query: 504 NITKKLRARSPLD 542
N+ K L + LD
Sbjct: 134 NVFKLLPQLTYLD 146
>AK223280-1|BAD97000.1| 249|Homo sapiens acidic (leucine-rich)
nuclear phosphoprotein 32 family, member A variant
protein.
Length = 249
Score = 35.5 bits (78), Expect = 0.16
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 156 RQETSPKSNAVDQSSSSP---EIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFP 326
R + K +D S S+ E T+ + LE S + S +N+P K+E
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSD 73
Query: 327 NWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKD-HDVEGLQDWKPEVIGKNAVRT 503
N + V K T ++ N ++DL +P K +++ L + EV N R
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE 133
Query: 504 NITKKLRARSPLD 542
N+ K L + LD
Sbjct: 134 NVFKLLPQLTYLD 146
>AF025684-1|AAB91548.1| 249|Homo sapiens cerebellar leucine rich
acidic nuclear protein protein.
Length = 249
Score = 35.5 bits (78), Expect = 0.16
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 156 RQETSPKSNAVDQSSSSP---EIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFP 326
R + K +D S S+ E T+ + LE S + S +N+P K+E
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSD 73
Query: 327 NWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKD-HDVEGLQDWKPEVIGKNAVRT 503
N + V K T ++ N ++DL +P K +++ L + EV N R
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE 133
Query: 504 NITKKLRARSPLD 542
N+ K L + LD
Sbjct: 134 NVFKLLPQLTYLD 146
>DQ083510-1|AAZ31261.1| 245|Homo sapiens hepatopoietin PCn127
protein.
Length = 245
Score = 34.3 bits (75), Expect = 0.38
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 156 RQETSPKSNAVDQSSSSP---EIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFP 326
R + K +D S S+ E T+ + LE S + S +N+P K+E
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDESEELEFFSATNVGLTSTANLPKLNKLKKLELSD 73
Query: 327 NWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKD-HDVEGLQDWKPEVIGKNAVRT 503
N + K T ++ N ++DL +P K+ +++ L + EV N R
Sbjct: 74 NRVSGGVEALAEKCPNLTHLNLCGNKIKDLSTTEPLKNLENLKSLDLFNCEVTNLNDYRE 133
Query: 504 NITKKLRARSPLD 542
N+ K L + LD
Sbjct: 134 NVFKLLLQLTYLD 146
>U14680-1|AAA73985.1| 1863|Homo sapiens breast and ovarian cancer
susceptibility protein.
Length = 1863
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1635
>L78833-1|AAC37594.1| 1863|Homo sapiens BRCA1 protein.
Length = 1863
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1635
>DQ478408-3|ABF14462.1| 1822|Homo sapiens early onset breast cancer 1
protein.
Length = 1822
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1635
>DQ190457-3|ABA29229.1| 1822|Homo sapiens breast cancer 1 early onset
protein.
Length = 1822
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1635
>DQ190456-3|ABA29226.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1635
>DQ190455-3|ABA29223.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1635
>DQ190454-3|ABA29220.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1635
>DQ190453-3|ABA29217.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1635
>DQ190452-3|ABA29214.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1635
>DQ190451-3|ABA29211.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1635
>DQ190450-3|ABA29208.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1635
>BC085615-1|AAH85615.1| 624|Homo sapiens BRCA1 protein protein.
Length = 624
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 479 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 531
>BC072418-1|AAH72418.1| 699|Homo sapiens BRCA1 protein protein.
Length = 699
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 479 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 531
>AY273801-1|AAP12647.1| 1863|Homo sapiens breast cancer 1, early onset
protein.
Length = 1863
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1635
>AF005068-1|AAB61673.1| 1792|Homo sapiens breast and ovarian cancer
susceptibility protein splice variant protein.
Length = 1792
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1512 RAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSRE 1564
>U64805-1|AAC00049.1| 759|Homo sapiens Brca1-delta11b protein.
Length = 759
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 479 RAPESARVGNIPSSTSALKVPQLKVAESAQGPAAAHTTDTAGYNAMEESVSRE 531
>BC115037-1|AAI15038.1| 1354|Homo sapiens BRCA1 protein protein.
Length = 1354
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1074 RAPESARVGNIPSSTSALKVPQLKVAESAQGPAAAHTTDTAGYNAMEESVSRE 1126
>AY751490-1|AAU93634.1| 1841|Homo sapiens breast and ovarian cancer
susceptibility protein protein.
Length = 1841
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 255 RDSHSASESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRD 413
R SA NIP+ ALK+ Q +Q P A H T T M+ + R+
Sbjct: 1583 RAPESARVGNIPSSTSALKVPQLKVAESAQGPAAAHTTDTAGYNAMEESVSRE 1635
>AK074402-1|BAB85071.1| 1336|Homo sapiens protein ( Homo sapiens
cDNA FLJ23822 fis, clone HUV00387. ).
Length = 1336
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 507 ITKKLRARSPLDQDLEDSLPRQIREIHNETRKSSRIIRDSRARLLEI 647
+ +K R R P L+ +L Q+R + N++R+ +R++ + ARLL I
Sbjct: 91 VRRKSRLRDP---GLQQTLRGQLRLLENDSREMARVLGELSARLLSI 134
>AC104650-2|AAY40932.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 507 ITKKLRARSPLDQDLEDSLPRQIREIHNETRKSSRIIRDSRARLLEI 647
+ +K R R P L+ +L Q+R + N++R+ +R++ + ARLL I
Sbjct: 91 VRRKSRLRDP---GLQQTLRGQLRLLENDSREMARVLGELSARLLSI 134
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,448,654
Number of Sequences: 237096
Number of extensions: 2126469
Number of successful extensions: 5271
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5271
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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