Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19b10
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 33 0.13
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 33 0.13
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 29 2.1
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical pr... 29 2.1
U80836-8|AAL32206.2| 212|Caenorhabditis elegans Hypothetical pr... 29 2.8
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF026209-4|AAW88411.1| 317|Caenorhabditis elegans Serpentine re... 29 2.8
AC006619-2|AAK68254.1| 434|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 29 3.8
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 28 5.0
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 28 5.0
AL117204-2|CAB76734.1| 272|Caenorhabditis elegans Hypothetical ... 28 6.6
AC006695-17|AAF39983.2| 327|Caenorhabditis elegans Hypothetical... 28 6.6
Z81066-7|CAB02973.1| 244|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z78418-4|CAB01698.1| 710|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 27 8.7
AL022289-6|CAA18377.1| 244|Caenorhabditis elegans Hypothetical ... 27 8.7
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 27 8.7
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 33.5 bits (73), Expect = 0.13
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 7/170 (4%)
Frame = +3
Query: 156 RQETSP-KSNAVDQSSSSPEIPTERLQALELKSPRDSHSASE-SNIP-----TKEHALKI 314
+ E +P K + + E E+ Q +E KSP+ S E IP T E +I
Sbjct: 940 KSEKAPEKPQEIQEIPKKSEKAPEKPQEIE-KSPKKSEKRQEIQEIPQKSEKTSEKRPEI 998
Query: 315 EQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKDHDVEGLQDWKPEVIGKNA 494
E+ P + KS P + +D Q +L + + D Q K IG
Sbjct: 999 EELPTFFKSSAPAQTPEIISDEDIFAQYESLLNAVFSEFQFVDDRTNYQLSKQIRIGMPQ 1058
Query: 495 VRTNITKKLRARSPLDQDLEDSLPRQIREIHNETRKSSRIIRDSRARLLE 644
+R KK + + LP+Q++ +H ++ + D+R L+E
Sbjct: 1059 IREWFRKKRESSVEEHRTNGTELPKQMKLLHEAYQRCPLLDEDARRDLVE 1108
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 33.5 bits (73), Expect = 0.13
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 7/170 (4%)
Frame = +3
Query: 156 RQETSP-KSNAVDQSSSSPEIPTERLQALELKSPRDSHSASE-SNIP-----TKEHALKI 314
+ E +P K + + E E+ Q +E KSP+ S E IP T E +I
Sbjct: 938 KSEKAPEKPQEIQEIPKKSEKAPEKPQEIE-KSPKKSEKRQEIQEIPQKSEKTSEKRPEI 996
Query: 315 EQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKDHDVEGLQDWKPEVIGKNA 494
E+ P + KS P + +D Q +L + + D Q K IG
Sbjct: 997 EELPTFFKSSAPAQTPEIISDEDIFAQYESLLNAVFSEFQFVDDRTNYQLSKQIRIGMPQ 1056
Query: 495 VRTNITKKLRARSPLDQDLEDSLPRQIREIHNETRKSSRIIRDSRARLLE 644
+R KK + + LP+Q++ +H ++ + D+R L+E
Sbjct: 1057 IREWFRKKRESSVEEHRTNGTELPKQMKLLHEAYQRCPLLDEDARRDLVE 1106
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical protein
C18D4.2b protein.
Length = 1376
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +3
Query: 135 SKHRLGLRQETSPKSNAVDQSSSSPEIPTERLQALELKSPRDSHSASESNIPTKEHALKI 314
+K +LG+ Q S + +SPE + R+ SESNI K + L I
Sbjct: 1013 AKLKLGITQSLSDSKEDPSTNEASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTI 1072
Query: 315 EQ 320
+Q
Sbjct: 1073 KQ 1074
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +3
Query: 135 SKHRLGLRQETSPKSNAVDQSSSSPEIPTERLQALELKSPRDSHSASESNIPTKEHALKI 314
+K +LG+ Q S + +SPE + R+ SESNI K + L I
Sbjct: 1013 AKLKLGITQSLSDSKEDPSTNEASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTI 1072
Query: 315 EQ 320
+Q
Sbjct: 1073 KQ 1074
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +3
Query: 135 SKHRLGLRQETSPKSNAVDQSSSSPEIPTERLQALELKSPRDSHSASESNIPTKEHALKI 314
+K +LG+ Q S + +SPE + R+ SESNI K + L I
Sbjct: 1013 AKLKLGITQSLSDSKEDPSTNEASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTI 1072
Query: 315 EQ 320
+Q
Sbjct: 1073 KQ 1074
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +3
Query: 135 SKHRLGLRQETSPKSNAVDQSSSSPEIPTERLQALELKSPRDSHSASESNIPTKEHALKI 314
+K +LG+ Q S + +SPE + R+ SESNI K + L I
Sbjct: 1013 AKLKLGITQSLSDSKEDPSTNEASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTI 1072
Query: 315 EQ 320
+Q
Sbjct: 1073 KQ 1074
>Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical
protein K01C8.5 protein.
Length = 707
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +3
Query: 159 QETSPKSNAVDQSSSSPEIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFPNWNK 338
+ TS + + V +SS SP + +R + K HS + P+ ++ + NW K
Sbjct: 318 KSTSSRHSNVSRSSKSPYLNDDRAPSRGSKCTSSHHSTPKLLTPSPQYLKDSDDDDNW-K 376
Query: 339 SQIP 350
+ IP
Sbjct: 377 NSIP 380
>U80836-8|AAL32206.2| 212|Caenorhabditis elegans Hypothetical
protein B0432.9 protein.
Length = 212
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -2
Query: 395 LHVS*SVCTGLMYCYGNLTLIPVRKLFNFQSVLFCGDIGLRCGM*VSGTLQFECLQTFGW 216
LHV+ S T ++ +G+L LF SV+ D+G +CG G ++ + GW
Sbjct: 53 LHVAPSTVTHVVVTHGHLDHCANLGLFQEASVIMDWDVGRKCG----GKAKYSVIP--GW 106
Query: 215 DFR 207
+R
Sbjct: 107 PYR 109
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
protein C18H2.1 protein.
Length = 1770
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 315 EQFPNWNKS--QIPVAIHKTGTDTSGDMQANTLRDLKRCKPCKDHDVEGLQDWKPEVIGK 488
+ F N K+ Q + K G GD A L++LKR V QDW E GK
Sbjct: 368 QNFTNSKKTLLQFTTDLEKIGNYKGGDKDAEELKNLKR--------VFQQQDW-TETFGK 418
Query: 489 NAVRTNITKKLRARSPLD 542
N ++ N K L + L+
Sbjct: 419 NFIK-NADKLLEVKGKLE 435
>AF026209-4|AAW88411.1| 317|Caenorhabditis elegans Serpentine
receptor, class h protein2, isoform b protein.
Length = 317
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 122 SKNTRHRMLSSFVHFPDYLLYFII 51
SK+T ML HF YLLYF++
Sbjct: 119 SKHTAPTMLYKITHFQTYLLYFLL 142
>AC006619-2|AAK68254.1| 434|Caenorhabditis elegans Hypothetical
protein C46C11.2 protein.
Length = 434
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 143 VFGSDRHSKNTRHRMLSSFVHFPDYLLYFII 51
+F S R+ K R+L+SF+H+ L FII
Sbjct: 396 LFHSTRYGKTRERRILTSFMHYVSCNLLFII 426
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 28.7 bits (61), Expect = 3.8
Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 9/155 (5%)
Frame = +3
Query: 156 RQETSPKSNAVDQSSSSPEIPTERLQALELKSPRDSHSASESNIPTKEHALKIEQFPNWN 335
R+ + + N ++ + P + QA ++PR S +++ A K+E +
Sbjct: 437 RKSQANEENLQEKETEDPTKTHDTNQAKSTRTPRGRRSNADAETMESVEAEKVETPTSSR 496
Query: 336 KSQIPVAIHKTGTDTSG-DMQANTLRDLKRC-----KPCKDHDVEGLQDWKPEVIGKNAV 497
+S K+ T + T+R K+ P ++ D E +++ P+ G+ A
Sbjct: 497 RSTRAKPPAKSAPVTPAVTNKRTTVRGRKKQGSITEDPIEEAD-ETIEETLPQKKGRGAA 555
Query: 498 RT--NITKKLRARSPLDQDLE-DSLPRQIREIHNE 593
++ + +KK P D D E + P ++ IH E
Sbjct: 556 KSAPSSSKKSAEYDPYDLDTEMEHHPEPLKNIHME 590
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +3
Query: 171 PKSNAVDQSSSSPEIPTERLQALELKSPRDSHSASESNIPTK----EHALKIEQFPNWNK 338
PKS V P+ P+E ++ ++ + + + SE+ + K + A+ E P+W
Sbjct: 460 PKSGVVAPRKIIPKKPSENVEKVDKRFQKGTQKKSEAVVEKKKGSSKSAVSGEMHPSWIA 519
Query: 339 SQI 347
SQ+
Sbjct: 520 SQL 522
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +3
Query: 171 PKSNAVDQSSSSPEIPTERLQALELKSPRDSHSASESNIPTK----EHALKIEQFPNWNK 338
PKS V P+ P+E ++ ++ + + + SE+ + K + A+ E P+W
Sbjct: 460 PKSGVVAPRKIIPKKPSENVEKVDKRFQKGTQKKSEAVVEKKKGSSKSAVSGEMHPSWIA 519
Query: 339 SQI 347
SQ+
Sbjct: 520 SQL 522
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 144 RLGLRQETSPKSNAVDQSSSSPEIPTERLQALELKSPR-DSHSASESNIPTKEHALKIE 317
++ + ++ PK + ++ +SP +E+ A+E+ + D+ +A ES+ P + K E
Sbjct: 136 KVAIVEKPEPKPEPITETEASPSKASEKDAAVEVSVEKVDAETAQESDSPQEAEKEKTE 194
>AL117204-2|CAB76734.1| 272|Caenorhabditis elegans Hypothetical
protein Y116A8C.3 protein.
Length = 272
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 163 SCRSPRRCLDLIGIVKTQDIGCYHLLYIFRIIYCILLFIELVC 35
S + P RCLD + V H YIF + C F+ +VC
Sbjct: 231 STKEPNRCLDFMLRVFASTTFDIHFYYIFAVQLC---FVVVVC 270
>AC006695-17|AAF39983.2| 327|Caenorhabditis elegans Hypothetical
protein W06H8.6 protein.
Length = 327
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 195 SSSSPEIPTERLQALELKSPRDSHSASESNIPTKEHAL 308
S SS E TER Q +L + S E+N+P ++H L
Sbjct: 84 SRSSAERETERAQRRQLLNTSLSKLREEANMPLRKHLL 121
>Z81066-7|CAB02973.1| 244|Caenorhabditis elegans Hypothetical
protein F17B5.5 protein.
Length = 244
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 220 VGISGELLDWSTALLFGDVSCRSPRRCLDLIGIVKTQDIGC 98
VG+ G+L +W A GD+ CLD G+ +T+ C
Sbjct: 196 VGLRGDLEEWRAAFTNGDLDRYG---CLDAPGLPQTKMYAC 233
>Z78418-4|CAB01698.1| 710|Caenorhabditis elegans Hypothetical
protein F25D7.5 protein.
Length = 710
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -3
Query: 391 MSPEVSVPVLCIATGI*LLFQFGNCSIFKACSFVGILDSDAECESRGLFSSSACRR 224
++P + VP+L +A + +LFQ + IF+ + I+D+ ES CRR
Sbjct: 361 VAPRMVVPLLLLAVALGVLFQ--SSKIFRGFLQISIIDN--RLESTSFNMDMRCRR 412
>Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical
protein W01C9.3 protein.
Length = 792
Score = 27.5 bits (58), Expect = 8.7
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Frame = +3
Query: 102 PMSCVFTMPIRSKHRLGLRQET--SPKSNAVDQSSSSPEIPTERLQALELKSPRDSHSAS 275
PMS F++ R+ +GL+Q T S + +A Q+ + ++ + + + + P + +
Sbjct: 73 PMSTTFSVNSRTSSLMGLQQPTVFSTQFSAQGQALPAQKVYSNDPRLVSIPRPAGTIPSL 132
Query: 276 ESNIPTKEHALKIEQFPNWNKSQIPVAIHKTGTDTSGDMQANTLRDLKR-CK 428
S P++ ++ P+ SQ +K + + N L++LK CK
Sbjct: 133 GSMPPSRSGSIITGPNPSPPSSQKRKNKNKESKSSLNKPKRNRLQELKNFCK 184
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +3
Query: 345 IPVAIHKTGTDTSGDMQANTLRDLKRCKPCKDHDVEGLQDWKPEVIGKNAVRTNITKKLR 524
+P + D ++ ++ D KR + + D + +D K + + R + + R
Sbjct: 41 VPTISSMSSGDNKSPSRSESVSDRKRDRS-RSRDRDRKKDRKKKDRSRERDRERRSSRSR 99
Query: 525 ARSPLDQDLEDSLPRQIREIHNETRKSSRIIRDSRAR 635
+RSP D+D E R+ R R+ SR D R R
Sbjct: 100 SRSPRDRDRE---RRRRRSRSPPPRRRSRSGGDRRRR 133
>AL022289-6|CAA18377.1| 244|Caenorhabditis elegans Hypothetical
protein F17B5.5 protein.
Length = 244
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 220 VGISGELLDWSTALLFGDVSCRSPRRCLDLIGIVKTQDIGC 98
VG+ G+L +W A GD+ CLD G+ +T+ C
Sbjct: 196 VGLRGDLEEWRAAFTNGDLDRYG---CLDAPGLPQTKMYAC 233
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +3
Query: 345 IPVAIHKTGTDTSGDMQANTLRDLKRCKPCKDHDVEGLQDWKPEVIGKNAVRTNITKKLR 524
+P + D ++ ++ D KR + + D + +D K + + R + + R
Sbjct: 41 VPTISSMSSGDNKSPSRSESVSDRKRDRS-RSRDRDRKKDRKKKDRSRERDRERRSSRSR 99
Query: 525 ARSPLDQDLEDSLPRQIREIHNETRKSSRIIRDSRAR 635
+RSP D+D E R+ R R+ SR D R R
Sbjct: 100 SRSPRDRDRE---RRRRRSRSPPPRRRSRSGGDRRRR 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,449,336
Number of Sequences: 27780
Number of extensions: 354125
Number of successful extensions: 1077
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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