Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19b09
         (658 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99942-2|CAB17072.1|  468|Caenorhabditis elegans Hypothetical pr...    31   0.72 
AF016657-17|AAB93664.2|   58|Caenorhabditis elegans Hypothetical...    30   1.7  
AF016451-13|AAB66007.1|  445|Caenorhabditis elegans Activated in...    29   2.2  
U23526-5|AAB36850.1|  391|Caenorhabditis elegans Acyltransferase...    28   5.1  
AC199172-3|ABO33274.1|  306|Caenorhabditis elegans F-box a prote...    28   5.1  
Z75953-3|CAB00100.1|  611|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF166171-1|AAD49860.1|  611|Caenorhabditis elegans adducin-head-...    27   8.9  

>Z99942-2|CAB17072.1|  468|Caenorhabditis elegans Hypothetical
           protein H13N06.3a protein.
          Length = 468

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +2

Query: 353 PRCQPNCKSKIVLDTICTSSHIMKECLKNNQSVQDFLVKEEFETSHWPCDKCLEVLKT 526
           P C  NC+ +  +     S    KECL   Q  +  +  E  ET H   D+ +++ K+
Sbjct: 26  PDCPMNCEKESQMTIASQSIEDFKECLYQMQEARKSVTNEILETGHIKADQ-VQIFKS 82


>AF016657-17|AAB93664.2|   58|Caenorhabditis elegans Hypothetical
           protein C16C4.1 protein.
          Length = 58

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 646 SKRSNALNANVSSWMQCGLLTVRSFYMKQFFNNNFPKHFYG 524
           +K   ++  N S +  CGLL+V    +++ FN N  KH +G
Sbjct: 15  AKFQTSIARNTSKFASCGLLSVEPVKLQKCFNEN-EKHTHG 54


>AF016451-13|AAB66007.1|  445|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 8 protein.
          Length = 445

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 2/104 (1%)
 Frame = +2

Query: 104 YENQNSMNYSVN-NINSHIFGR-SEGKIKSYKSCTDLRAWSHDEKARDRYLRDWMRSDMP 277
           Y N  +MN ++N N N+ ++   +    +   +C      + D     +  +   +   P
Sbjct: 242 YNNNQNMNQNMNQNTNTQMYNPYNTNTNQGSANCAPACQPACDNSCTSQQAQPVYQQAQP 301

Query: 278 VYIISVRTLVTLLKIMTCKTSGRLAPRCQPNCKSKIVLDTICTS 409
            Y +   T   +      + S   AP CQP C      D  CTS
Sbjct: 302 TYQVQQTTAAPMYDPYNNQGSANCAPACQPAC------DNSCTS 339


>U23526-5|AAB36850.1|  391|Caenorhabditis elegans
           Acyltransferase-like protein 12 protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +2

Query: 404 TSSHIMKECLKNNQSVQDFLVKEEFETSHWPCDKCLEVLKTIKMFW 541
           +  +++KE L     ++D L+ E ++T H+P DK   +    +M +
Sbjct: 314 SDENLLKEFLYERYIIKDKLLAEFYKTGHFPGDKTKVIPNNYEMMF 359


>AC199172-3|ABO33274.1|  306|Caenorhabditis elegans F-box a protein
           protein 31 protein.
          Length = 306

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 288 MIYTGISDLIQSLRYRSRAFSSWLQALRSVQDLYDL 181
           +IY G S  I+ + YR+ AF+     L++V  LY L
Sbjct: 81  VIYNGQSKTIKGVHYRNAAFNDLKILLKNVSKLYIL 116


>Z75953-3|CAB00100.1|  611|Caenorhabditis elegans Hypothetical
           protein F57F5.4a protein.
          Length = 611

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 107 ENQNSMNYSVNNINSHIFGRSEGKIKSYKSCTDLRAWSHDEKA 235
           E+ +S N  +N INS +  + EG+ +S +   D++    +E A
Sbjct: 240 ESTSSTNNQLNEINSFVVPKFEGRQESEQLFRDVKVEQFEESA 282


>AF166171-1|AAD49860.1|  611|Caenorhabditis elegans
           adducin-head-domain-related protein protein.
          Length = 611

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 107 ENQNSMNYSVNNINSHIFGRSEGKIKSYKSCTDLRAWSHDEKA 235
           E+ +S N  +N INS +  + EG+ +S +   D++    +E A
Sbjct: 240 ESTSSTNNQLNEINSFVVPKFEGRQESEQLFRDVKVEQFEESA 282


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,483,466
Number of Sequences: 27780
Number of extensions: 297033
Number of successful extensions: 786
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)