Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19b09
(658 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.48
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 25 0.48
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 25 0.48
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 25 0.48
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 25 0.48
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 25 0.84
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 1.5
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 3.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 4.5
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 4.5
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 4.5
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 7.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 7.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 7.8
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.4 bits (53), Expect = 0.48
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 373 AVGLTSRR*PSTGLTSHDFQ*CDQSANRYDIHRHIRPH 260
A GL++R S+ + ++ +Q+ N Y H+H+R H
Sbjct: 97 ATGLSNRSSTSSNDPKNQYK--NQNNNHYTSHQHLRTH 132
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.48
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 62 KITVQKDNISEYGQYENQNSMNYSVNN 142
KI N +Y Y N N+ NY+ NN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNN 106
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.48
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 62 KITVQKDNISEYGQYENQNSMNYSVNN 142
KI N +Y Y N N+ NY+ NN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNN 106
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.48
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 62 KITVQKDNISEYGQYENQNSMNYSVNN 142
KI N +Y Y N N+ NY+ NN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNN 106
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.48
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 62 KITVQKDNISEYGQYENQNSMNYSVNN 142
KI N +Y Y N N+ NY+ NN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNN 106
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 24.6 bits (51), Expect = 0.84
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 271 YAGVYHIGSHFGHIIENH 324
Y GVYH+ +H H +H
Sbjct: 270 YGGVYHLDNHHVHHANHH 287
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 89 SEYGQYENQNSMNYSVNNINSHIF 160
S Y Y N N+ NY NN N ++
Sbjct: 325 SNYNNYNNYNNNNY--NNYNKKLY 346
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 98 GQYENQNSMNYSVNNINS 151
G+Y NQN+ N + +N N+
Sbjct: 420 GRYHNQNAGNQNADNQNA 437
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +2
Query: 68 TVQKDNISEYGQYENQNSMNYSVNNIN 148
++ I Y N N NY+ NN N
Sbjct: 84 SLSNKTIHNNNNYNNNNYNNYNYNNNN 110
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 467 KEEFETSHWPCDKCLE 514
K++ +T W CD+C E
Sbjct: 460 KQQGDTCCWVCDQCEE 475
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 467 KEEFETSHWPCDKCLE 514
K++ +T W CD+C E
Sbjct: 550 KQQGDTCCWVCDQCEE 565
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 89 SEYGQYENQNSMNYSVNNINSH 154
S Y Y N + NY+ NN N++
Sbjct: 92 SNYNNYNNNYNNNYN-NNYNNN 112
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 89 SEYGQYENQNSMNYSVNNINSH 154
S Y Y N + NY+ NN N++
Sbjct: 92 SNYNNYNNNYNNNYN-NNYNNN 112
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +2
Query: 86 ISEYGQYENQNSMNYSVNNINSHIFGRSEGKIKSYK 193
IS N+ NY+ NN N++ + +YK
Sbjct: 315 ISSLSNKTIHNNNNYNNNNYNNNYNNYNNNNYNNYK 350
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,051
Number of Sequences: 438
Number of extensions: 3747
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -