Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19b05
         (622 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75547-14|CAA99901.2|  461|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z70205-2|CAA94116.1|  529|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z66512-8|CAA91324.2|  349|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AL023835-13|CAA19497.4|  304|Caenorhabditis elegans Hypothetical...    28   6.2  
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z75547-14|CAA99901.2|  461|Caenorhabditis elegans Hypothetical
           protein R11D1.7 protein.
          Length = 461

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 321 VTSSTQEPVCSDVTECVASIFST*MAGLMYLVLLFLDATES 199
           +   T E V S +  C+  +F+T    ++YL +L L A ES
Sbjct: 60  IDKQTDEQVASHM--CLFEVFATLFVNIIYLSMLHLSAVES 98


>Z70205-2|CAA94116.1|  529|Caenorhabditis elegans Hypothetical
           protein C11H1.3 protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 128 DCELKRYNHVFDEAGENTHYHSDSDSVASRKSKTR 232
           DCE K+     D+  ++   HSD DSV + +   R
Sbjct: 469 DCESKKSEESEDDERKSQAAHSDDDSVTANEDSAR 503


>Z66512-8|CAA91324.2|  349|Caenorhabditis elegans Hypothetical
           protein F52H3.4 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/67 (23%), Positives = 24/67 (35%)
 Frame = +2

Query: 161 DEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTPHPHSD 340
           + A EN+    D  SV   K+ TR+I P      I +           C D  + +    
Sbjct: 69  ENADENSKNKEDPQSVVKEKTTTRFIKPKSEYVSISSDSESEEDSDSECSDSDSVNEFFA 128

Query: 341 YRSNSTP 361
           Y+    P
Sbjct: 129 YKPPEAP 135


>AL023835-13|CAA19497.4|  304|Caenorhabditis elegans Hypothetical
           protein Y37A1B.15 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 395 LKIHSNPVHLRMGSNYSCNRCVGAE*RHQHKNPSAVTSLNALLQSFQRKW 246
           LKI SN   +  G N  CN C+ AE  H  +       +  L ++F RKW
Sbjct: 29  LKIWSNTEIVLAGGNVICNLCI-AEKSHAVQFDRKY-MIKTLSKTFSRKW 76


>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
           protein C49C3.4 protein.
          Length = 1566

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 314 HQHKNPSAVTSLNALLQSFQRKW 246
           H   NP+A  +LN++  SF R W
Sbjct: 411 HVESNPTAQITLNSISASFDRSW 433


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,833,177
Number of Sequences: 27780
Number of extensions: 286756
Number of successful extensions: 749
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)