Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19b04
(670 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 29 0.61
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 29 0.61
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 28 1.1
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 28 1.4
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 27 3.2
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.2
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 27 3.2
SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr ... 27 3.2
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 26 4.3
SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|... 26 4.3
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 26 4.3
SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|ch... 26 5.6
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.6
SPAC23C4.05c |||LEA domain protein|Schizosaccharomyces pombe|chr... 25 7.5
SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr... 25 7.5
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 25 7.5
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 7.5
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 25 7.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 9.9
SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces pombe... 25 9.9
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 25 9.9
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 29.1 bits (62), Expect = 0.61
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +2
Query: 347 FINNTKPDIIEQFSKMMTDEEKS--KIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDS 520
FI+N +P + K + K+ K+ + VK +R REK K S
Sbjct: 785 FISNVRPKLFAYPPKSVQPTAKTVQKVETAVLSTTVKAQARAKRAE------REKASKGS 838
Query: 521 NEDEDKVE--SVDETYENPYIVDKSQLEEI 604
N+DE K++ + +E P +D+ + ++I
Sbjct: 839 NDDEMKIDKKTTEEKEATPMEMDEEKSQDI 868
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 29.1 bits (62), Expect = 0.61
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 449 KENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIV-----DKSQLEEIERK 613
KE++ + L KD+ EK K +NED K E+ + E I +K+ +E E K
Sbjct: 424 KESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDEKTDSKETEDK 483
Query: 614 LEPLMSK 634
+E SK
Sbjct: 484 VEETESK 490
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 500 EKFGKDSNEDEDKVESVDETYENPYIVDKSQLEE--IERKLEPLMSKNKRNSVASPN 664
E F K ++ +K +S+ ETYE K +LEE +E ++ +R+ +A+ N
Sbjct: 51 EAFRKTVDDMYEKQKSIRETYEKDINKLKRELEELGVEANTASYRNRGERSELAASN 107
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 227 LKHQLMNSFWCKQVDGNTKRNSLYTFLA 144
L+H + NSF +DG+T N FLA
Sbjct: 246 LRHAINNSFNSISIDGDTSTNDTIAFLA 273
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 26.6 bits (56), Expect = 3.2
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = +2
Query: 353 NNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIRE--KFGKDSNE 526
NNTK D ++ + K+ I K L ++ N P ++++ K K+SN
Sbjct: 110 NNTKAD-----AEACLLKSKNYIKKSLQEIVYLTNMQPNVSWNVLQEPTRGIKVPKESNN 164
Query: 527 DEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPNLI 670
+ + V E +N V+ + E+E M+K + + S +L+
Sbjct: 165 TQQNNQFVMEPSQNKGNVNDANFFEVEYARNENMNKLSSSELISDDLL 212
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 533 DKVESVDETYENPYIVDKSQLEEIERKLEPLMSKN 637
+K ESVD ENP + + I+ +L +MSK+
Sbjct: 13 EKKESVDVKRENPSFTNSIKALPIQSELSAMMSKD 47
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -3
Query: 614 VSFLFLQVVIYQLCMDFHTFRQRIRL 537
V L ++++++CM F T +RIR+
Sbjct: 844 VDMYSLGIILFEMCMTFSTSMERIRI 869
>SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 339
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +1
Query: 193 LHQNEFISWCFKFIKPTTKPN*KIAKIFFPTPLN 294
LH+ +F C+++++ N A++FF L+
Sbjct: 72 LHEQDFYDLCYQYLRKAASQNVVYAEMFFDPQLH 105
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 4.3
Identities = 19/78 (24%), Positives = 31/78 (39%)
Frame = +2
Query: 389 KMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYEN 568
K + DE K + + E E S + I+E NE++ K S YE+
Sbjct: 501 KKLQDENSEKTETIAQLEQIIEELHEELRSLEEESIKESSATQQNENQHKRSSRKLLYED 560
Query: 569 PYIVDKSQLEEIERKLEP 622
+ ++ +RKL P
Sbjct: 561 KQAIQEAHTINTKRKLWP 578
>SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 260
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 512 KDSNEDE--DKVESVDETYENPYIVDKSQLEEIER 610
K SNE + V+ + EN YIVDK ++ E+++
Sbjct: 24 KHSNEKKYLKSVKGKNNENENSYIVDKKRMNELKK 58
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 26.2 bits (55), Expect = 4.3
Identities = 25/87 (28%), Positives = 36/87 (41%)
Frame = +2
Query: 353 NNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDE 532
N KPD+I K D S+ KL+ A E Q L+KD ++NE
Sbjct: 917 NGAKPDVIGASGKKPIDLSSSEPIKLVFKEANNE-QAQSISRSLIKDSEGSI--NTNETL 973
Query: 533 DKVESVDETYENPYIVDKSQLEEIERK 613
+ V+E E+ + KS E + K
Sbjct: 974 ESTSIVNEIEESA-VQTKSYSESMWNK 999
>SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 611
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 416 KIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETY 562
K+ LLH++ VK+ LPE L+K + + E+K +S+ T+
Sbjct: 420 KLRLLLHELLVKKKALPELDKDLLKFVWVVDFPLFSPTEEKNQSITSTH 468
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 25.8 bits (54), Expect = 5.6
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 401 DEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIV 580
D K+ ++K H A E Q G ++ E+ D +EDED+ E D N +++
Sbjct: 178 DTSKNGLSKKQHSEAQPEVQ------GNDDEVEEEDDDDDDEDEDEDEDEDNNNNNRWLL 231
>SPAC23C4.05c |||LEA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 431
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 497 REKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASP 661
R + + + +DKV ++ ++ PY+ + L R ++ L +N SV SP
Sbjct: 216 RRYYDIEERKSQDKVTNITDSQPAPYMKEIIHLWSDGRLIDFLRERNIPISVLSP 270
>SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 511
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 353 NNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNED 529
N P I+ +K + KS + D + + P C G K + +KFG D + +
Sbjct: 320 NYHNPSILLIKAKKINANHKSSSRPISLDATIPR-KYPPHCIGTDKAVPQKFGADFHNE 377
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.4 bits (53), Expect = 7.5
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +2
Query: 539 VESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSV 652
V+ ++ Y +KSQ +E+E++ +PL ++ N++
Sbjct: 512 VQEAEKLYNEQVDREKSQFKEVEKQNQPLAVFSESNTL 549
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.4 bits (53), Expect = 7.5
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -3
Query: 626 SMVPVSFLFLQVVIYQLCMDFHTFRQRIRLCPRLH*NLYRTFP---EYLLQDQ 477
S++ VS + +IYQL +DF F I C +++ + T+ E LQ+Q
Sbjct: 1025 SLIRVSMDTVCALIYQLNVDFAIFIPMIDKCLKMNGVTHETYSILVEQFLQEQ 1077
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 25.4 bits (53), Expect = 7.5
Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +2
Query: 377 EQFSKMMTDEEKSKIAKLLHDVA--VKENQLPERCSGLVKDIREKFGKDSNEDEDKVESV 550
+ F M D+ +I + + +++ +E+ R +G + E+ ++ E+E++ E+
Sbjct: 269 DMFDGMDEDDLAGQIEQGMLELSQDTRESTAEPRAAG-EESASEEEEEEEEEEEEENEAD 327
Query: 551 DETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPNLI 670
DET EN + E +LE + K ++++ + N I
Sbjct: 328 DETRENKR--QNRLVREFISELESSIQKRRKDADEATNPI 365
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 368 DIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPE 469
D+IE+F K+ + E+ ++ L+ +K L E
Sbjct: 1264 DLIEKFEKLSSSEKNDNLSNLIERQIIKYRSLFE 1297
>SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Frame = +2
Query: 482 LVKDIREKFGKDSNED------EDKVESVDETYENPYIVDKSQ 592
L++ REKFGKD ++ K +D T E P+ V +++
Sbjct: 33 LIEWFREKFGKDISQPSVSQILSSKYSYLDNTVEKPWDVKRNR 75
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = +2
Query: 515 DSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASP 661
D+N +ED ++ + + +++ + EE + EP+++ +K+NS + P
Sbjct: 61 DTNYEEDIIDDEESAQVDEEELEEEEEEEEDATPEPVVT-SKKNSRSKP 108
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,793,139
Number of Sequences: 5004
Number of extensions: 61551
Number of successful extensions: 223
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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