Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19b02
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     26   0.73 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.0  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 26.2 bits (55), Expect = 0.73
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -2

Query: 409 NVLHFDLCRTVEESTIKKGLLYLTDSQEHLSLTEQFSLPS*SPLE 275
           +++H D+C  +EE+T+     Y+T   +H   T  + L   S  E
Sbjct: 340 DIIHSDVCGPMEETTLGGCRYYMTLIDDHSRYTFVYFLKKKSEAE 384


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 136 HVFSCYKTVILKRIL 92
           HVF CY TVI   +L
Sbjct: 948 HVFDCYTTVIPHTVL 962


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 156 SDTNNNHNVDASCN 197
           S+ NNN N  +SCN
Sbjct: 155 SNNNNNSNSSSSCN 168


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,374
Number of Sequences: 2352
Number of extensions: 9628
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)