Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19b02
(560 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 25 0.52
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 0.91
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 0.91
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 0.91
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 0.91
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 0.91
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 23 2.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 6.4
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 8.5
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 25.0 bits (52), Expect = 0.52
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +3
Query: 186 ASCNKTNTVKEKWPVQLSLCRASTSRGLSHSSGDYDGSENCSVSDRCSCESVKYNKPF 359
+S + TNT + + Q L S L+ S D + CS+ S S KPF
Sbjct: 363 SSLDNTNTNDQDYSSQNYLTVHSFPSTLNIPSVKIDEDQKCSIESITSVNSTSSPKPF 420
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 94 RFSLILPFYNMKIHGQFV 147
+FS I P+ N GQFV
Sbjct: 76 KFSNIAPYLNQIYGGQFV 93
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 0.91
Identities = 21/102 (20%), Positives = 46/102 (45%)
Frame = +3
Query: 198 KTNTVKEKWPVQLSLCRASTSRGLSHSSGDYDGSENCSVSDRCSCESVKYNKPFLIVDSS 377
K+ +K+ + R+ T G H+S Y +CS DR + E K ++ + + +
Sbjct: 202 KSGNESKKYATSSNSLRSRT-HGFQHTSSHYSRERSCS-RDR-NREYRKKDRRYEKLHNE 258
Query: 378 TVLHKSKWSTFKNYLKRNIQRNKIFHKEKKSRNAVYEQSEKD 503
+ ++ K Y + + K++ E++ R Y ++ K+
Sbjct: 259 KEKLLEERTSCKRYSRSREREQKLYKNEREYRK--YGETSKE 298
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 0.91
Identities = 21/102 (20%), Positives = 46/102 (45%)
Frame = +3
Query: 198 KTNTVKEKWPVQLSLCRASTSRGLSHSSGDYDGSENCSVSDRCSCESVKYNKPFLIVDSS 377
K+ +K+ + R+ T G H+S Y +CS DR + E K ++ + + +
Sbjct: 202 KSGNESKKYATSSNSLRSRT-HGFQHTSSHYSRERSCS-RDR-NREYRKKDRRYEKLHNE 258
Query: 378 TVLHKSKWSTFKNYLKRNIQRNKIFHKEKKSRNAVYEQSEKD 503
+ ++ K Y + + K++ E++ R Y ++ K+
Sbjct: 259 KEKLLEERTSCKRYSRSREREQKLYKNEREYRK--YGETSKE 298
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 0.91
Identities = 21/102 (20%), Positives = 46/102 (45%)
Frame = +3
Query: 198 KTNTVKEKWPVQLSLCRASTSRGLSHSSGDYDGSENCSVSDRCSCESVKYNKPFLIVDSS 377
K+ +K+ + R+ T G H+S Y +CS DR + E K ++ + + +
Sbjct: 202 KSGNESKKYATSSNSLRSRT-HGFQHTSSHYSRERSCS-RDR-NREYRKKDRRYEKLHNE 258
Query: 378 TVLHKSKWSTFKNYLKRNIQRNKIFHKEKKSRNAVYEQSEKD 503
+ ++ K Y + + K++ E++ R Y ++ K+
Sbjct: 259 KEKLLEERTSCKRYSRSREREQKLYKNEREYRK--YGETSKE 298
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 0.91
Identities = 21/102 (20%), Positives = 46/102 (45%)
Frame = +3
Query: 198 KTNTVKEKWPVQLSLCRASTSRGLSHSSGDYDGSENCSVSDRCSCESVKYNKPFLIVDSS 377
K+ +K+ + R+ T G H+S Y +CS DR + E K ++ + + +
Sbjct: 202 KSGNESKKYATSSNSLRSRT-HGFQHTSSHYSRERSCS-RDR-NREYRKKDRRYEKLHNE 258
Query: 378 TVLHKSKWSTFKNYLKRNIQRNKIFHKEKKSRNAVYEQSEKD 503
+ ++ K Y + + K++ E++ R Y ++ K+
Sbjct: 259 KEKLLEERTSCKRYSRSREREQKLYKNEREYRK--YGETSKE 298
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.2 bits (50), Expect = 0.91
Identities = 21/102 (20%), Positives = 46/102 (45%)
Frame = +3
Query: 198 KTNTVKEKWPVQLSLCRASTSRGLSHSSGDYDGSENCSVSDRCSCESVKYNKPFLIVDSS 377
K+ +K+ + R+ T G H+S Y +CS DR + E K ++ + + +
Sbjct: 191 KSGNESKKYATSSNSLRSRT-HGFQHTSSHYSRERSCS-RDR-NREYRKKDRRYEKLHNE 247
Query: 378 TVLHKSKWSTFKNYLKRNIQRNKIFHKEKKSRNAVYEQSEKD 503
+ ++ K Y + + K++ E++ R Y ++ K+
Sbjct: 248 KEKLLEERTSCKRYSRSREREQKLYKNEREYRK--YGETSKE 287
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 538 NLVILFSHIHFKSFSLCSY 482
N I+F I FKSFSL ++
Sbjct: 131 NSTIIFLLIRFKSFSLLNF 149
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +3
Query: 198 KTNTVKEKWPVQLSLCRASTSRGLSHSSGDYDGSENCS 311
K+ +K+ + R+ T G H+S Y +CS
Sbjct: 202 KSGNESKKYATSSNSLRSRT-HGFQHTSSHYSRERSCS 238
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 8.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 464 LFFMKDFVPLNVSFKVILECA 402
L+ + +PL +SF V+L C+
Sbjct: 140 LYLLFATLPLRLSFCVVLACS 160
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,816
Number of Sequences: 438
Number of extensions: 2704
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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