Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19a17
         (303 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0197 + 6596197-6596402,6596766-6596828,6599679-6599795,660...    27   2.1  
10_02_0194 + 6552638-6552895,6553088-6553246,6553551-6553702,655...    27   2.8  

>10_02_0197 +
           6596197-6596402,6596766-6596828,6599679-6599795,
           6600311-6600545,6600771-6600929,6601159-6601310,
           6602511-6602571
          Length = 330

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 236 SKL**ILPYKFWSGPITCWTVKFE 165
           SK+  + PYK+WS  ITC    F+
Sbjct: 208 SKVLKVYPYKYWSSMITCLVGGFQ 231


>10_02_0194 +
           6552638-6552895,6553088-6553246,6553551-6553702,
           6553741-6553804
          Length = 210

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 236 SKL**ILPYKFWSGPITCWTVKFE 165
           SK+  + PYK+WS  +TC    F+
Sbjct: 87  SKVLKVYPYKYWSSMVTCLVGGFQ 110


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,900,098
Number of Sequences: 37544
Number of extensions: 118461
Number of successful extensions: 161
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 351703996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)