Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19a13
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071393-1|AAL49015.1|  153|Drosophila melanogaster RE45482p pro...   177   9e-45
AF017096-2|AAC39087.1|  153|Drosophila melanogaster protein ( Dr...   177   9e-45
AE014297-670|AAF54164.1|  153|Drosophila melanogaster CG2846-PA ...   177   9e-45
AY060898-1|AAL28446.1|  153|Drosophila melanogaster GM04958p pro...   177   2e-44
AE013599-322|AAF59277.1|  681|Drosophila melanogaster CG1850-PA ...    31   2.0  
AY071512-1|AAL49134.1|  310|Drosophila melanogaster RE56714p pro...    30   2.6  
AE014297-1899|AAF55098.1|  556|Drosophila melanogaster CG14855-P...    30   2.6  
AY094680-1|AAM11033.1|  743|Drosophila melanogaster GH06335p pro...    29   8.0  
AY069846-1|AAL39991.1|  760|Drosophila melanogaster SD09318p pro...    29   8.0  
AL009195-7|CAA15704.1|  744|Drosophila melanogaster EG:30B8.6 pr...    29   8.0  
AJ012609-1|CAA10073.1|  954|Drosophila melanogaster RasGap prote...    29   8.0  
AE014298-2320|AAS65383.1|  954|Drosophila melanogaster CG9209-PD...    29   8.0  
AE014298-2319|AAN09380.1|  954|Drosophila melanogaster CG9209-PC...    29   8.0  
AE014298-2318|AAF48558.2|  954|Drosophila melanogaster CG9209-PB...    29   8.0  
AE014298-2317|AAN09381.2|  954|Drosophila melanogaster CG9209-PA...    29   8.0  
AE014298-373|AAF45763.2|  743|Drosophila melanogaster CG3078-PA ...    29   8.0  

>AY071393-1|AAL49015.1|  153|Drosophila melanogaster RE45482p
           protein.
          Length = 153

 Score =  177 bits (432), Expect = 9e-45
 Identities = 78/138 (56%), Positives = 102/138 (73%)
 Frame = +1

Query: 154 EVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEMVANIGWCPF 333
           E+V+GFGRGSKELG PTAN+PLEVVKSLP+ L  G YYGWA VD GPV++MV +IGW PF
Sbjct: 12  EIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHKMVLSIGWNPF 71

Query: 334 YQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQIREDIKNSEQNL 513
           Y NKE SVETH++H+F  D YG  LKI ++GYLR E++F+ L++LI  IR DI+ ++  L
Sbjct: 72  YNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAIRGDIEQAKAFL 131

Query: 514 KQPSAQSLRNHSFFNKSM 567
            +     L+   FF + +
Sbjct: 132 DEADKAKLKEAPFFTEKL 149


>AF017096-2|AAC39087.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterprophosphoribosylamidotransferase
           (Prat) gene, completecds. ).
          Length = 153

 Score =  177 bits (432), Expect = 9e-45
 Identities = 78/138 (56%), Positives = 102/138 (73%)
 Frame = +1

Query: 154 EVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEMVANIGWCPF 333
           E+V+GFGRGSKELG PTAN+PLEVVKSLP+ L  G YYGWA VD GPV++MV +IGW PF
Sbjct: 12  EIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHKMVLSIGWNPF 71

Query: 334 YQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQIREDIKNSEQNL 513
           Y NKE SVETH++H+F  D YG  LKI ++GYLR E++F+ L++LI  IR DI+ ++  L
Sbjct: 72  YNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAIRGDIEQAKAFL 131

Query: 514 KQPSAQSLRNHSFFNKSM 567
            +     L+   FF + +
Sbjct: 132 DEADKAKLKEAPFFTEKL 149


>AE014297-670|AAF54164.1|  153|Drosophila melanogaster CG2846-PA
           protein.
          Length = 153

 Score =  177 bits (432), Expect = 9e-45
 Identities = 78/138 (56%), Positives = 102/138 (73%)
 Frame = +1

Query: 154 EVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEMVANIGWCPF 333
           E+V+GFGRGSKELG PTAN+PLEVVKSLP+ L  G YYGWA VD GPV++MV +IGW PF
Sbjct: 12  EIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHKMVLSIGWNPF 71

Query: 334 YQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQIREDIKNSEQNL 513
           Y NKE SVETH++H+F  D YG  LKI ++GYLR E++F+ L++LI  IR DI+ ++  L
Sbjct: 72  YNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAIRGDIEQAKAFL 131

Query: 514 KQPSAQSLRNHSFFNKSM 567
            +     L+   FF + +
Sbjct: 132 DEADKAKLKEAPFFTEKL 149


>AY060898-1|AAL28446.1|  153|Drosophila melanogaster GM04958p
           protein.
          Length = 153

 Score =  177 bits (430), Expect = 2e-44
 Identities = 77/138 (55%), Positives = 102/138 (73%)
 Frame = +1

Query: 154 EVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEMVANIGWCPF 333
           E+V+GFGRGSKE+G PTAN+PLEVVKSLP+ L  G YYGWA VD GPV++MV +IGW PF
Sbjct: 12  EIVRGFGRGSKEMGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHKMVLSIGWNPF 71

Query: 334 YQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQIREDIKNSEQNL 513
           Y NKE SVETH++H+F  D YG  LKI ++GYLR E++F+ L++LI  IR DI+ ++  L
Sbjct: 72  YNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAIRGDIEQAKAFL 131

Query: 514 KQPSAQSLRNHSFFNKSM 567
            +     L+   FF + +
Sbjct: 132 DEADKAKLKEAPFFTEKL 149


>AE013599-322|AAF59277.1|  681|Drosophila melanogaster CG1850-PA
           protein.
          Length = 681

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = -3

Query: 296 TGPVST*AHP**TPGSKPFGKDFTTSKG*LAVGHP-SSLEPLPKPLTTSLK----YSSPS 132
           T PVST A     PGS PF   +TT     A   P  +L+PLP P+ + LK    YSS S
Sbjct: 587 TVPVSTPALVLAEPGSNPFLVRYTTKSA--ARPLPLQTLQPLPTPIASELKQQVTYSSTS 644


>AY071512-1|AAL49134.1|  310|Drosophila melanogaster RE56714p
           protein.
          Length = 310

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 29/83 (34%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
 Frame = -2

Query: 321 SYICYHLIYRSCVNLSPSIINTWLQTFW*RFYNFQRIISCWAS-------*FLRTSSKTL 163
           SY+ Y LI      +SPS+ N  L T    FY    I +CW +        FL  SS  L
Sbjct: 191 SYLMYILILEY---VSPSLRNVGLNTVLGSFYCLGLIGACWLAVWVGHWRIFLACSSVPL 247

Query: 162 DYLSQIFFSFCYLVWQWLPTSND 94
             L  +F+       QWL T ND
Sbjct: 248 -LLVTLFYFLVQESAQWLVTRND 269


>AE014297-1899|AAF55098.1|  556|Drosophila melanogaster CG14855-PA
           protein.
          Length = 556

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 29/83 (34%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
 Frame = -2

Query: 321 SYICYHLIYRSCVNLSPSIINTWLQTFW*RFYNFQRIISCWAS-------*FLRTSSKTL 163
           SY+ Y LI      +SPS+ N  L T    FY    I +CW +        FL  SS  L
Sbjct: 191 SYLMYILILEY---VSPSLRNVGLNTVLGSFYCLGLIGACWLAVWVGHWRIFLACSSVPL 247

Query: 162 DYLSQIFFSFCYLVWQWLPTSND 94
             L  +F+       QWL T ND
Sbjct: 248 -LLVTLFYFLVQESAQWLVTRND 269


>AY094680-1|AAM11033.1|  743|Drosophila melanogaster GH06335p
           protein.
          Length = 743

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -2

Query: 219 QRIISCWAS*FLRTSSKTLDYLSQIFFSFCYL--VWQWLPTSNDT 91
           Q I+SC  S  LR   + +  L+  FF  C L  +  W P+S+D+
Sbjct: 603 QLIVSCTLSMLLRHVKRIVVILAGFFFHSCLLLALSSWKPSSDDS 647


>AY069846-1|AAL39991.1|  760|Drosophila melanogaster SD09318p
           protein.
          Length = 760

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 IGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQPSAQSLR 540
           + YL G + F CLDA+I + R++      +L  P    ++
Sbjct: 113 VRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQ 152


>AL009195-7|CAA15704.1|  744|Drosophila melanogaster EG:30B8.6
           protein.
          Length = 744

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -2

Query: 219 QRIISCWAS*FLRTSSKTLDYLSQIFFSFCYL--VWQWLPTSNDT 91
           Q I+SC  S  LR   + +  L+  FF  C L  +  W P+S+D+
Sbjct: 604 QLIVSCTLSMLLRHVKRIVVILAGFFFHSCLLLALSSWKPSSDDS 648


>AJ012609-1|CAA10073.1|  954|Drosophila melanogaster RasGap protein
           protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 IGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQPSAQSLR 540
           + YL G + F CLDA+I + R++      +L  P    ++
Sbjct: 307 VRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQ 346


>AE014298-2320|AAS65383.1|  954|Drosophila melanogaster CG9209-PD,
           isoform D protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 IGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQPSAQSLR 540
           + YL G + F CLDA+I + R++      +L  P    ++
Sbjct: 307 VRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQ 346


>AE014298-2319|AAN09380.1|  954|Drosophila melanogaster CG9209-PC,
           isoform C protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 IGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQPSAQSLR 540
           + YL G + F CLDA+I + R++      +L  P    ++
Sbjct: 307 VRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQ 346


>AE014298-2318|AAF48558.2|  954|Drosophila melanogaster CG9209-PB,
           isoform B protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 IGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQPSAQSLR 540
           + YL G + F CLDA+I + R++      +L  P    ++
Sbjct: 307 VRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQ 346


>AE014298-2317|AAN09381.2|  954|Drosophila melanogaster CG9209-PA,
           isoform A protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 421 IGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQPSAQSLR 540
           + YL G + F CLDA+I + R++      +L  P    ++
Sbjct: 307 VRYLMGGRTFECLDAVINRYRKEQIVEGHSLNHPVVNGIQ 346


>AE014298-373|AAF45763.2|  743|Drosophila melanogaster CG3078-PA
           protein.
          Length = 743

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -2

Query: 219 QRIISCWAS*FLRTSSKTLDYLSQIFFSFCYL--VWQWLPTSNDT 91
           Q I+SC  S  LR   + +  L+  FF  C L  +  W P+S+D+
Sbjct: 603 QLIVSCTLSMLLRHVKRIVVILAGFFFHSCLLLALSSWKPSSDDS 647


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,530,879
Number of Sequences: 53049
Number of extensions: 625668
Number of successful extensions: 1624
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)