Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19a12
         (440 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034489-1|CAA22461.1|  538|Caenorhabditis elegans Hypothetical ...    27   4.6  
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec...    27   6.0  
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l...    27   6.0  

>AL034489-1|CAA22461.1|  538|Caenorhabditis elegans Hypothetical
           protein Y7A5A.1 protein.
          Length = 538

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 31  PVHSYRAMHRCSNPAGGYQFL 93
           P H+ RAM + +   GGY FL
Sbjct: 459 PTHAMRAMEKFTRDVGGYSFL 479


>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
           receptor protein 2 protein.
          Length = 1338

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 175 AGLI-FIARCYSFTVEVNREHLLSTYFIREIGTRQRDSNTGASLDTNAPDVL 23
           +GLI F +RCYS T+E N +   +         +   S +G S+ T+ PD L
Sbjct: 332 SGLIQFDSRCYSMTIETNEKKQRTME-----DAQTYCSQSGGSIITSPPDAL 378


>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
           protein LAT-2 protein.
          Length = 1338

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 175 AGLI-FIARCYSFTVEVNREHLLSTYFIREIGTRQRDSNTGASLDTNAPDVL 23
           +GLI F +RCYS T+E N +   +         +   S +G S+ T+ PD L
Sbjct: 332 SGLIQFDSRCYSMTIETNEKKQRTME-----DAQTYCSQSGGSIITSPPDAL 378


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,276,869
Number of Sequences: 27780
Number of extensions: 227208
Number of successful extensions: 366
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)