Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19a01
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   3.7  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   3.7  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   6.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.4  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    23   8.4  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   8.4  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 149 LDTVGEGLTRKIMDISFRTKISNTVAKVIETVF 247
           LDT    +T  +++I FR+  ++T+A  + T+F
Sbjct: 312 LDTFSICVTVIVLNIHFRSPQTHTMAPWVRTIF 344


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 478 SCSRLGPFCHILRCFVLV 425
           +CSR  PFC+ L  F +V
Sbjct: 88  TCSRTAPFCYTLWTFDIV 105


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 387 PRPNLRTSGVRR*TSTKHRKM*QKGPKREQDVKRY 491
           P+  L T+ VR   S +HR+  Q+  +++Q  +RY
Sbjct: 230 PQQQLWTTVVRGRPSQRHRQPQQQQQQQQQQGERY 264


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 66  SLFGLHSLNNRRVNSPNSYSVRTTF 140
           SLF    + N   ++PNS SVR  F
Sbjct: 255 SLFRASRVRNELPSAPNSLSVRYNF 279


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
            protease protein.
          Length = 1322

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 155  CPVYYERSSYGIRVRRIHTA 96
            C + Y +S+Y +R+   HTA
Sbjct: 1120 CLIGYPKSTYRVRIGDYHTA 1139


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
            protein.
          Length = 1322

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 155  CPVYYERSSYGIRVRRIHTA 96
            C + Y +S+Y +R+   HTA
Sbjct: 1120 CLIGYPKSTYRVRIGDYHTA 1139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,818
Number of Sequences: 2352
Number of extensions: 14266
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)