Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19a01
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021447-4|CAB60285.3|  330|Caenorhabditis elegans Hypothetical ...    29   2.9  
AF016657-14|AAB93663.3|  495|Caenorhabditis elegans Hypothetical...    28   5.0  
Z93379-6|CAB07591.2| 1108|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF016449-10|AAG24001.2|  353|Caenorhabditis elegans Serpentine r...    28   6.7  
AC025726-9|AAK73924.1|  594|Caenorhabditis elegans Hypothetical ...    27   8.8  

>AL021447-4|CAB60285.3|  330|Caenorhabditis elegans Hypothetical
           protein F19B2.8 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -3

Query: 331 ILVFPNGLI*HVFLRIFYVLLVPLLFVSKHCFYNFCDSVRYLGSKRY 191
           IL++   L    +L I + LLV LL +SK   Y +  + RY+   +Y
Sbjct: 116 ILIYSQVLTILTYLTITFQLLVSLLAISKFLIYFYPSTERYVVLSKY 162


>AF016657-14|AAB93663.3|  495|Caenorhabditis elegans Hypothetical
           protein C16C4.13 protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 295 FLRIFYVLLVPLLFVSKHC 239
           F  IFYVL++  LFV KHC
Sbjct: 282 FFDIFYVLILFKLFVLKHC 300


>Z93379-6|CAB07591.2| 1108|Caenorhabditis elegans Hypothetical
           protein F21H7.9 protein.
          Length = 1108

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 577 FLFSLYRYRVSNGIFIRKLNFVRCHNIL 494
           F+FSL R  +SNG++    +F++CH  L
Sbjct: 638 FMFSLIR-DISNGLYFIHSSFLKCHGQL 664


>AF016449-10|AAG24001.2|  353|Caenorhabditis elegans Serpentine
           receptor, class t protein5 protein.
          Length = 353

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 288 GYFMFYSCLYCSSPNTVSITFATVLDILVRNDMSIIFL 175
           GYF FY   +C  P  + IT + ++   V N ++ I +
Sbjct: 93  GYFAFYGVSFCQQPIFLFITGSFIIGCWVSNCVASILM 130


>AC025726-9|AAK73924.1|  594|Caenorhabditis elegans Hypothetical
           protein Y71G12B.23a protein.
          Length = 594

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 144 IDWTLWAKA*QGKLWTYRFEPRYLTL 221
           + W +W  A  G L+ Y F  RY TL
Sbjct: 483 LKWMIWVFAILGILYQYNFHERYKTL 508


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,578,303
Number of Sequences: 27780
Number of extensions: 346655
Number of successful extensions: 823
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)